GRMZM2G114873 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G114873 T039885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.858 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G114873_P01 bHLH 290 322
GRMZM2G114873_P02 bHLH 159 209

Links

Other bHLH family TFs
Other Zea mays TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.858
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.869
30169.m006403 Ricinus communis 30169.m006403 I 0.858
Ca_14007 Cicer arietinum Ca_14007 I 0.854
Ca_07284 Cicer arietinum Ca_07284 I 0.846
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.858
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.869
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.854
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.854
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.854
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.854
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.854
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.869
TCM_036484 Theobroma cacao TCM_036484 I 0.882
Si001123m.g Setaria italica Si001123m.g I 0.914
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.858
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.914
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.858
OS04G0489600 Oryza sativa OS04G0489600 I 0.854
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.854
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.882
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.857
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.854
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.858
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.914
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.854
MDP0000307685 Malus domestica MDP0000307685 I 0.858
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.857
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.857
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.869
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.854
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.847
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.857
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.854
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.858
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.854
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.858
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.854
OS01G0900800 Oryza sativa OS01G0900800 I 0.869
F775_26506 Aegilops tauschii F775_26506 I 0.854
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.869
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.854
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.858
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.858
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.854
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.869
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.866
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.866
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.866
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.854
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.854
F775_24576 Aegilops tauschii F775_24576 I 0.869
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.854
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.869
Bra015456 Brassica rapa Bra015456 I 0.857
Bo5g007030 Brassica oleracea Bo5g007030 I 0.857
Bo5g006980 Brassica oleracea Bo5g006980 I 0.857
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.854
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.869
BHLH128 Arabidopsis thaliana AT1G05805 I 0.854
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.869
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.854
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.869
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.854
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.869
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.854
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.869
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.854
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.869
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.854
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.869
OBART04G16900 Oryza barthii OBART04G16900 I 0.854
OBART01G40680 Oryza barthii OBART01G40680 I 0.869
OB04G24170 Oryza brachyantha OB04G24170 I 0.854
OB01G49420 Oryza brachyantha OB01G49420 I 0.869
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.869
GRMZM2G137426 Zea mays GRMZM2G137426 N 0.891
AMTR_s00005p00255540 Amborella trichopoda AMTR_s00005p00255540 N 0.853
POPTR_0013s11200 Populus trichocarpa POPTR_0013s11200 N 0.882
POPTR_0019s10900 Populus trichocarpa POPTR_0019s10900 N 0.882
Traes_3AL_ECA64A822 Triticum aestivum Traes_3AL_ECA64A822 N 0.862
cassava38615.m1 Manihot esculenta cassava38615.m1 N 0.882
Cla003934 Citrullus lanatus Cla003934 N 0.882