LotgiG59712 (Lottia gigantea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 LotgiG59712 T040900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.859 0.788
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.859 0.788
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.859 0.788
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.859 0.788
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.859 0.788
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.859 0.788
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.859 0.788
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.859 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP59712 bHLH 15 67

Links

Other bHLH family TFs
Other Lottia gigantea TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EDEG_03732 Edhazardia aedis EDEG_03732 N
EHEL_111580 Encephalitozoon hellem EHEL_111580 N
Eint_111580 Encephalitozoon intestinalis Eint_111580 N
EROM_111580 Encephalitozoon romaleae EROM_111580 N
M896_121570 Ordospora colligata M896_121570 N
NAPIS_ORF00695 Nosema apis NAPIS_ORF00695 N
NBO_10g0022 Nosema bombycis NBO_10g0022 N
NBO_10g0033 Nosema bombycis NBO_10g0033 N
NCER_100107 Nosema ceranae NCER_100107 N
NEPG_00677 Nematocida parisii ertm1 NEPG_00677 N
NERG_00027 Nematocida sp NERG_00027 N
THOM_2912 Trachipleistophora hominis THOM_2912 N
VCUG_02296 Vavraia culicis VCUG_02296 N
VICG_01884 Vittaforma corneae VICG_01884 N