ATMYC2 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 scaffold_103634.1 T044497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.914 1.000
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.914 0.979
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.914 0.979
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.914 0.958
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.890 0.896
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.917
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.858 0.604
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.646
BHLH14
M09785_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G00870_01 		0.840 0.792
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_103634.1 bHLH 453 500

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.000
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.000
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.000
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.000
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.000
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.000
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.000
ASU_06642 Ascaris suum ASU_06642 I 0.000
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.000
L889_g28085 Steinernema feltiae L889_g28085 I 0.000
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.000
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.000
AMAM009924 Anopheles maculatus AMAM009924 I 0.000
AMAM003778 Anopheles maculatus AMAM003778 I 0.000
AFAF020264 Anopheles farauti AFAF020264 I 0.000
AFAF001557 Anopheles farauti AFAF001557 I 0.000
ACOM027979 Anopheles coluzzii ACOM027979 I 0.000
AATE018011 Anopheles atroparvus AATE018011 I 0.000
L893_g1446 Steinernema glaseri L893_g1446 I 0.000
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.000
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 0.000
NECAME_10938 Necator americanus NECAME_10938 I 0.000
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I 0.000
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.000
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.000
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.000
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.000
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.000
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.000
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I 0.000
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.000
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.000
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.000
GI16394 Drosophila mojavensis FBgn0139142 I 0.000
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.000
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I 0.000
CapteG130298 Capitella teleta CapteG130298 I 0.000
CBG03854 Caenorhabditis briggsae CBG03854 I 0.000
CBN09920 Caenorhabditis brenneri CBN09920 I 0.000
CBN18838 Caenorhabditis brenneri CBN18838 I 0.000
CJA03417 Caenorhabditis japonica CJA03417 I 0.000
CRE08084 Caenorhabditis remanei CRE08084 I 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.000
ACEP14857 Atta cephalotes ACEP14857 I 0.000
GL14771 Drosophila persimilis FBgn0152375 I 0.000
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
HelroG85268 Helobdella robusta HelroG85268 I 0.000
ISCW018799 Ixodes scapularis ISCW018799 I 0.000
WBGene00238210 Onchocerca volvulus WBGene00238210 I 0.000
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.000
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.000
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.000
HHAL001110-PA Halyomorpha halys HHAL001110-PA I 0.000
LCUP002242 Lucilia cuprina LCUP002242 I 0.000
SMU15028607 Schmidtea mediterranea SMU15028607 I 0.000
Minc05804 Meloidogyne incognita Minc05804 I 0.000
AATE000335 Anopheles atroparvus AATE000335 I 0.000
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N 0.000
Smp_168610 Schistosoma mansoni Smp_168610 N 0.000