scaffold_402920.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 scaffold_402920.1 T044506_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_402920.1 bHLH 68 116

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.854
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.852
Cla019977 Citrullus lanatus Cla019977 I 0.854
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.842
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.842
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.854
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.852
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N 0.864
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N 0.864
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N 0.845
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.890
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.890
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.890
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.890
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.890
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.864
Cucsa.340200 Cucumis sativus Cucsa.340200 N 0.864
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N 0.864
30180.m001071 Ricinus communis 30180.m001071 N 0.864
Lus10018020.g Linum usitatissimum Lus10018020.g N 0.864
Lus10042017.g Linum usitatissimum Lus10042017.g N 0.864
MDP0000138102 Malus domestica MDP0000138102 N 0.864
MDP0000213892 Malus domestica MDP0000213892 N 0.864
Pavir.J02699 Panicum virgatum Pavir.J02699 N 0.851
Pavir.J24868 Panicum virgatum Pavir.J24868 N 0.851
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N 0.864
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.890
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.890
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.890
PK23387.1 Cannabis sativa PK23387.1 N 0.864
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N 0.864
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N 0.851
Bo3g035410 Brassica oleracea Bo3g035410 N 0.890
Bo4g012960 Brassica oleracea Bo4g012960 N 0.890
Bo4g112750 Brassica oleracea Bo4g112750 N 0.887
Bo4g190700 Brassica oleracea Bo4g190700 N 0.890
Bra004599 Brassica rapa Bra004599 N 0.890
Bra014672 Brassica rapa Bra014672 N 0.887
Bra016951 Brassica rapa Bra016951 N 0.890
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N 0.851
GLYMA02G23590 Glycine max GLYMA02G23590 N 0.864
GLYMA03G28150 Glycine max GLYMA03G28150 N 0.864
GLYMA19G30910 Glycine max GLYMA19G30910 N 0.864
GRMZM2G027068 Zea mays GRMZM2G027068 N 0.851
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N 0.864
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N 0.864
OS03G0811400 Oryza sativa OS03G0811400 N 0.851
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N 0.851
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N 0.864
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N 0.864
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N 0.864
Sb01g003830 Sorghum bicolor Sb01g003830 N 0.851
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N 0.851
TCM_024016 Theobroma cacao TCM_024016 N 0.864
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.877
Ca_07159 Cicer arietinum Ca_07159 N 0.864
Cla017413 Citrullus lanatus Cla017413 N 0.864
Pm025589 Prunus mume Pm025589 N 0.864
BHLH106 Arabidopsis thaliana AT2G41130 N 0.890