CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMAR012521
(
Strigamia maritima
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
SMAR012521
T044943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.862
0.865
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.862
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR012521-PA
bHLH
104
156
RRCTANKKERRRTLSINSAFTDLRDCIPNVPSDTKLSKIKTLRLATSYIAYLM
Links
Other
bHLH
family TFs
Other
Strigamia maritima
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_170444
Baudoinia compniacensis
BAUCODRAFT_170444
N
CSUB01_04340
Colletotrichum sublineola
CSUB01_04340
N
fgenesh1_pg.sca_82_chr10_2_0000101
Nectria haematococca
fgenesh1_pg.sca_82_chr10_2_0000101
N