Smp_123420 (Schistosoma mansoni)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Smp_123420 T044968_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.857 0.870
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.857 0.870
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.857 0.870
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.857 0.870
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.857 0.870
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.857 0.870
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.857 0.870
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.857 0.833
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.857 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_123420.1:pep bHLH 48 101

Links

Other bHLH family TFs
Other Schistosoma mansoni TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm014329 Prunus mume Pm014329 I
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I
GLYMA11G33720 Glycine max GLYMA11G33720 I
GLYMA18G04500 Glycine max GLYMA18G04500 I
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
Cucsa.006260 Cucumis sativus Cucsa.006260 N
Cla020062 Citrullus lanatus Cla020062 N
Cucsa.280310 Cucumis sativus Cucsa.280310 N
mgf025772m Mimulus guttatus mgf025772m N
Aquca_064_00017 Aquilegia coerulea Aquca_064_00017 N
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N
Lus10017626.g Linum usitatissimum Lus10017626.g N
MDP0000237978 Malus domestica MDP0000237978 N
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N
RGL1 Arabidopsis thaliana AT1G66350 N
Bo2g052880 Brassica oleracea Bo2g052880 N
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N
F775_03572 Aegilops tauschii F775_03572 N
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N
GLYMA05G27190 Glycine max GLYMA05G27190 N
MLOC_67940 Hordeum vulgare MLOC_67940 N
SLR1 Oryza sativa OS03G0707600 N
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N
cassava14484.m1 Manihot esculenta cassava14484.m1 N
Sb01g010660 Sorghum bicolor Sb01g010660 N
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N
TCM_010965 Theobroma cacao TCM_010965 N
TRIUR3_18790 Triticum urartu TRIUR3_18790 N
GAI1 Vitis vinifera VIT_01s0011g05260 N
Ca_05046 Cicer arietinum Ca_05046 N
GAI Arabidopsis thaliana AT1G14920 N
28677.m000055 Ricinus communis 28677.m000055 N