CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aan_R005913
(
Calypte anna
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Aan_R005913
T046507_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes5
M01747_2.00
Mus musculus
NVCRCGYGBN
NVCRCGYGBN
PBM
Weirauch et al.(2014)
pTH5450
0.860
0.891
HES5
M02809_2.00
Homo sapiens
YGRCACGTGCCD
HGGCACGTGYCR
SELEX
Jolma et al.(2013)
HES5_1
0.860
0.891
HES5
M02810_2.00
Homo sapiens
YGGCACGTGCCR
YGGCACGTGCCR
SELEX
Jolma et al.(2013)
HES5_2
0.860
0.891
HES5
M04216_2.00
Homo sapiens
VRCACGTGCC
GGCACGTGYB
SELEX
Yin et al.(2017)
HES5_eDBD_HT-SELEX
0.860
0.891
HES5
M04217_2.00
Homo sapiens
VRCACGTGCC
GGCACGTGYB
SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_1
0.860
0.891
HES5
M04218_2.00
Homo sapiens
VSACRCKY
RMGYGTSB
SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_2
0.860
0.891
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R005913
bHLH
17
73
NRLRKPIVEKLRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADILEMTVSYLKYSR
Links
Other
bHLH
family TFs
Other
Calypte anna
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OIDMADRAFT_52514
Oidiodendron maius
OIDMADRAFT_52514
I
PAN0_012d4528
Pseudozyma antarctica
PAN0_012d4528
N
PFL1_05744
Pseudozyma flocculosa
PFL1_05744
N
PHSY_003590
Pseudozyma hubeiensis
PHSY_003590
N
sr15307
Sporisorium reilianum
sr15307
N
UHOR_06907
Ustilago hordei
UHOR_06907
N
UM04421
Ustilago maydis
UM04421
N