Alligator_sinensis_CCG011591.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG011591.1 T046654_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes5
M01747_2.00 		Mus musculus
NVCRCGYGBN
NVCRCGYGBN		 PBM
Weirauch et al.(2014)
pTH5450 		0.860 0.873
HES5
M02809_2.00 		Homo sapiens
YGRCACGTGCCD
HGGCACGTGYCR		 SELEX
Jolma et al.(2013)
HES5_1 		0.860 0.873
HES5
M02810_2.00 		Homo sapiens
YGGCACGTGCCR
YGGCACGTGCCR		 SELEX
Jolma et al.(2013)
HES5_2 		0.860 0.873
HES5
M04216_2.00 		Homo sapiens
VRCACGTGCC
GGCACGTGYB		 SELEX
Yin et al.(2017)
HES5_eDBD_HT-SELEX 		0.860 0.873
HES5
M04217_2.00 		Homo sapiens
VRCACGTGCC
GGCACGTGYB		 SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_1 		0.860 0.873
HES5
M04218_2.00 		Homo sapiens
VSACRCKY
RMGYGTSB		 SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_2 		0.860 0.873
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG011591.1 bHLH 17 73

Links

Other bHLH family TFs
Other Alligator sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hes5 Mus musculus ENSMUSG00000048001 D 0.860
HES5 Homo sapiens ENSG00000197921 D 0.860
HES5 Pan troglodytes ENSPTRG00000024233 I 0.860
ENSMMUG00000014688 Macaca mulatta ENSMMUG00000014688 I 0.860
HES5 Monodelphis domestica ENSMODG00000008212 I 0.890
ENSOARG00000018071 Ovis aries ENSOARG00000018071 I 0.860
HES5 Otolemur garnettii ENSOGAG00000030950 I 0.860
ENSPANG00000022730 Papio anubis ENSPANG00000022730 I 0.860
HES5 Procavia capensis ENSPCAG00000001025 I 0.860
ENSAPLG00000007967 Anas platyrhynchos ENSAPLG00000007967 I 0.890
Hes5 Rattus norvegicus ENSRNOG00000013850 I 0.860
ENSSHAG00000014397 Sarcophilus harrisii ENSSHAG00000014397 I 0.890
HES5 Tursiops truncatus ENSTTRG00000003782 I 0.860
Aan_R005913 Calypte anna Aan_R005913 I 0.890
Afo_R003314 Aptenodytes forsteri Afo_R003314 I 0.890
Brh_R011663 Buceros rhinoceros Brh_R011663 I 0.890
Tal_R007855 Tyto alba Tal_R007855 I 0.890
HES5 Callithrix jacchus ENSCJAG00000002549 I 0.860
HES5 Canis familiaris ENSCAFG00000019421 I 0.860
ENSMEUG00000013913 Macropus eugenii ENSMEUG00000013913 I 0.890
ENSCPOG00000027139 Cavia porcellus ENSCPOG00000027139 I 0.860
HES5 Gorilla gorilla ENSGGOG00000010276 I 0.860
HES5 Gallus gallus ENSGALG00000001141 I 0.890
HES5 Meleagris gallopavo ENSMGAG00000002009 I 0.890
HES5 Bos taurus ENSBTAG00000002483 I 0.860
ENSCSAG00000000715 Chlorocebus sabaeus ENSCSAG00000000715 I 0.860
HES5 Erinaceus europaeus ENSEEUG00000008377 I 0.860
Gfo_R009738 Geospiza fortis Gfo_R009738 N 0.858
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N 0.858
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N 0.858
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N 0.858
Gfo_R009739 Geospiza fortis Gfo_R009739 N 0.858
Pvit_15591 Pogona vitticeps Pvit_15591 N 0.858
Tal_R007853 Tyto alba Tal_R007853 N 0.858
Tal_R007854 Tyto alba Tal_R007854 N 0.858
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N 0.858
hes8 Xenopus tropicalis XB-GENE-5952810 N 0.882
Afo_R003312 Aptenodytes forsteri Afo_R003312 N 0.858
Aan_R005911 Calypte anna Aan_R005911 N 0.858
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N 0.858
ENSSHAG00000014651 Sarcophilus harrisii ENSSHAG00000014651 N 0.858
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N 0.858
ENSPSIG00000014816 Pelodiscus sinensis ENSPSIG00000014816 N 0.882
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N 0.858
ENSPSIG00000004046 Pelodiscus sinensis ENSPSIG00000004046 N 0.882
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N 0.858
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N 0.858
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N 0.858
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N 0.858