Cmyd_10013769 (Chelonia mydas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cmyd_10013769 T047100_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 1.000
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 1.000
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 1.000
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 1.000
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 1.000
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 1.000
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 0.981
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 0.981
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 0.981
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 0.981
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 0.981
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 0.981
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 0.981
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 0.981
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 0.981
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 0.981
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 0.981
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 0.981
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 0.981
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 0.981
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10013769 bHLH 46 100

Links

Other bHLH family TFs
Other Chelonia mydas TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NHP10 Saccharomyces cerevisiae YDL002C D
CAGL0M10505g Candida glabrata CAGL0M10505g I
603_YDL002C Saccharomyces bayanus 603_YDL002C I
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I
LALA0_S09e06216g Lachancea lanzarotensis LALA0_S09e06216g I
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I
CD36_81110 Candida dubliniensis CD36_81110 I
G210_3517 Candida maltosa G210_3517 I
GNLVRS01_PISO0G08322g Millerozyma farinosa GNLVRS01_PISO0G08322g N
SAKL0C11308g Lachancea kluyveri SAKL0C11308g N
Kwal_11003 Kluyveromyces waltii Kwal_11003 N
KLTH0G16566g Kluyveromyces thermotolerans KLTH0G16566g N
CPAG_00203 Candida parapsilosis CPAG_00203 N
CORT_0B03230 Candida orthopsilosis CORT_0B03230 N
CTRG_02198 Candida tropicalis CTRG_02198 N
gwh1.8.1.855.1 Pichia stipitis gwh1.8.1.855.1 N
DEHA2F18194g Debaryomyces hansenii DEHA2F18194g N
KUCA_T00005075001 Kuraishia capsulata KUCA_T00005075001 N
GNLVRS01_PISO0H08323g Millerozyma farinosa GNLVRS01_PISO0H08323g N
HPODL_00357 Ogataea parapolymorpha HPODL_00357 N
SPAPADRAFT_141112 Spathaspora passalidarum SPAPADRAFT_141112 N
KLTH0G16566g Lachancea thermotolerans KLTH0G16566g N
PICST_12709 Scheffersomyces stipitis PICST_12709 N
LELG_02079 Lodderomyces elongisporus LELG_02079 N