Ogr11553 (Ophisaurus gracilis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ogr11553 T047536_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.914 1.000
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.914 1.000
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.914 1.000
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.914 1.000
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.914 1.000
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.914 0.980
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.859 0.857
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.859 0.857
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.859 0.857
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.859 0.857
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.859 0.857
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.859 0.857
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.859 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr11553 bHLH 1 49

Links

Other bHLH family TFs
Other Ophisaurus gracilis TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBF1 Saccharomyces cerevisiae YPL128C D
TDEL_0A05760 Torulaspora delbrueckii TDEL_0A05760 I
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I
Kwal_8619 Kluyveromyces waltii Kwal_8619 I
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I
25381_YPL128C Saccharomyces bayanus 25381_YPL128C I
22419_YPL128C Saccharomyces paradoxus 22419_YPL128C I
21800_YPL128C Saccharomyces mikatae 21800_YPL128C I
Scas_Contig700.45 Saccharomyces castellii Scas_Contig700.45 I
ZYRO0F06292g Zygosaccharomyces rouxii ZYRO0F06292g I
ZBAI_05815 Zygosaccharomyces bailii ZBAI_05815 I
ZBAI_00516 Zygosaccharomyces bailii ZBAI_00516 I
TPHA_0F03170 Tetrapisispora phaffii TPHA_0F03170 I
CAGL0M02761g Candida glabrata CAGL0M02761g I
TBLA_0B04080 Tetrapisispora blattae TBLA_0B04080 I
SU7_3534 Saccharomyces arboricola SU7_3534 I
SKUD_201904 Saccharomyces kudriavzevii SKUD_201904 I
NDAI_0E02210 Naumovozyma dairenensis NDAI_0E02210 I
NCAS_0C01470 Naumovozyma castellii NCAS_0C01470 I
Kpol_530p11 Vanderwaltozyma polyspora Kpol_530p11 I
Kpol_1072p42 Vanderwaltozyma polyspora Kpol_1072p42 I
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I
KLLA0_D06765g Kluyveromyces lactis KLLA0_D06765g I
KAFR_0H02660 Kazachstania africana KAFR_0H02660 I
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I
TBLA_0J00460 Tetrapisispora blattae TBLA_0J00460 N