Pm018950 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm018950 T047627_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.914 0.960
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018950 bHLH 82 131

Links

Other bHLH family TFs
Other Prunus mume TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_3307-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.1 N
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N
PYU1_G003105 Pythium ultimum PYU1_G003105 N
PYU1_G003104 Pythium ultimum PYU1_G003104 N
PITG_19362 Phytophthora infestans PITG_19362 N
PITG_19361 Phytophthora infestans PITG_19361 N
PITG_11731 Phytophthora infestans PITG_11731 N
Physo131313 Phytophthora sojae Physo131313 N
Physo131312 Phytophthora sojae Physo131312 N
Phyra73306 Phytophthora ramorum Phyra73306 N
Phyra73305 Phytophthora ramorum Phyra73305 N
maker-pve_contig_603-snap-gene-0.9 Pythium vexans maker-pve_contig_603-snap-gene-0.9 N
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N
ALNC14_098180 Albugo laibachii ALNC14_098180 N
maker-piw_contig_3307-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.0 N
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N
maker-par_contig_173-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_173-fgenesh-gene-0.4 N
maker-pag1_scaffold_151-fgenesh-gene-0.9 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.9 N
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N
fgenesh_scip_prom.46568.8839 Phytophthora kernoviae fgenesh_scip_prom.46568.8839 N
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N
fgenesh_scip_prom.28083.12017 Phytophthora lateralis fgenesh_scip_prom.28083.12017 N
fgenesh_masked-pir_contig_142-abinit-gene-0.47 Pythium irregulare fgenesh_masked-pir_contig_142-abinit-gene-0.47 N
F443_03223 Phytophthora parasitica F443_03223 N
F443_03220 Phytophthora parasitica F443_03220 N
ALNC14_114790 Albugo laibachii ALNC14_114790 N