fgenesh2_pg.scaffold_89000062 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 fgenesh2_pg.scaffold_89000062 T048609_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_89000062 bHLH 237 286

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.000
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.000
Ca_22078 Cicer arietinum Ca_22078 I 0.000
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.000
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.000
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.000
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.000
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.000
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.000
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.000
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.000
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.000
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.000
mgf019317m Mimulus guttatus mgf019317m I 0.000
30128.m008730 Ricinus communis 30128.m008730 I 0.000
27763.m000042 Ricinus communis 27763.m000042 I 0.000
Pm029445 Prunus mume Pm029445 I 0.000
Pm029442 Prunus mume Pm029442 I 0.000
Pm029440 Prunus mume Pm029440 I 0.000
PK17827.1 Cannabis sativa PK17827.1 I 0.000
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.000
MYB75 Arabidopsis thaliana AT1G56650 I 0.000
PK05760.1 Cannabis sativa PK05760.1 I 0.000
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.000
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.000
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.000
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.000
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.000
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.000
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.000
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.000
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.000
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.000
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.000
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I 0.000
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.000
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.000
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.000
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.000
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.000
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.000
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.000
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.000
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.000
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.000
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.000
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.000
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.000
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.000
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.000
Bra039763 Brassica rapa Bra039763 I 0.000
Bra004162 Brassica rapa Bra004162 I 0.000
Bra001917 Brassica rapa Bra001917 I 0.000
Bo6g100940 Brassica oleracea Bo6g100940 I 0.000
Bo6g099880 Brassica oleracea Bo6g099880 I 0.000
Bo00835s060 Brassica oleracea Bo00835s060 I 0.000
MYB90 Arabidopsis thaliana AT1G66390 I 0.000
MYB114 Arabidopsis thaliana AT1G66380 I 0.000
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.000
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.000
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.000
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.000
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.000
TCM_026054 Theobroma cacao TCM_026054 I 0.000
TCM_019192 Theobroma cacao TCM_019192 I 0.000
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.000
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.000
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.000
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.000
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.000
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.000
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.000
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.000
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.000
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.000
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.000
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.000