Cagra.1062s0003 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.1062s0003 T049232_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.870 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1062s0003.1.p bHLH 31 79

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_18840 Ancylostoma caninum ANCCAN_18840 N
ANCDUO_15583 Ancylostoma duodenale ANCDUO_15583 N
HCOI00051800 Haemonchus contortus HCOI00051800 N
HPBE_0000946001 Heligmosomoides bakeri HPBE_0000946001 N
NECAME_09957 Necator americanus NECAME_09957 N
SVUK_0000102101 Strongylus vulgaris SVUK_0000102101 N