Carubv10003163m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10003163m.g T049335_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003163m bHLH 97 142

Links

Other bHLH family TFs
Other Capsella rubella TFs

325 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N
TCM_015349 Theobroma cacao TCM_015349 N
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N
TRIUR3_33378 Triticum urartu TRIUR3_33378 N
SIGE Vitis vinifera VIT_16s0050g02520 N
Ca_03953 Cicer arietinum Ca_03953 N
Cla004302 Citrullus lanatus Cla004302 N
Pm019782 Prunus mume Pm019782 N
30169.m006532 Ricinus communis 30169.m006532 N
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N
Cucsa.012950 Cucumis sativus Cucsa.012950 N
mgf001401m Mimulus guttatus mgf001401m N
mgf006107m Mimulus guttatus mgf006107m N
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N
Carubv10000608m.g Capsella rubella Carubv10000608m.g N
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N
Lus10014934.g Linum usitatissimum Lus10014934.g N
MDP0000831937 Malus domestica MDP0000831937 N
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N
Pavir.J13718 Panicum virgatum Pavir.J13718 N
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N
PK06897.1 Cannabis sativa PK06897.1 N
OB05G35020 Oryza brachyantha OB05G35020 N
BGIOSGA020460 Oryza indica BGIOSGA020460 N
Bo7g097160 Brassica oleracea Bo7g097160 N
Bo9g013770 Brassica oleracea Bo9g013770 N
Bra009735 Brassica rapa Bra009735 N
Bra026466 Brassica rapa Bra026466 N
F775_08366 Aegilops tauschii F775_08366 N
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N
GLYMA04G41691 Glycine max GLYMA04G41691 N
GLYMA06G13100 Glycine max GLYMA06G13100 N
GLYMA13G08390 Glycine max GLYMA13G08390 N
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N
LPERR05G23180 Leersia perrieri LPERR05G23180 N
MLOC_61094 Hordeum vulgare MLOC_61094 N
MTR_3g090900 Medicago truncatula MTR_3g090900 N
SIGE Arabidopsis thaliana AT5G24120 N
OBART05G27520 Oryza barthii OBART05G27520 N
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N
OLONG_028119 Oryza longistaminata OLONG_028119 N
OMERI05G23510 Oryza meridionalis OMERI05G23510 N
ONIVA05G29570 Oryza nivara ONIVA05G29570 N
OPUNC05G25110 Oryza punctata OPUNC05G25110 N
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N
POPTR_0015s02320 Populus trichocarpa POPTR_0015s02320 N
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N
Sb09g030110 Sorghum bicolor Sb09g030110 N
Si021904m.g Setaria italica Si021904m.g N