Eucgr.E01043 (Eucalyptus grandis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Eucgr.E01043 T049624_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.857 0.800
BHLH14
M09785_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G00870_01 		0.854 0.720
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.849 0.620
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.846 0.780
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.846 0.780
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.846 0.760
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.846 0.760
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.846 0.760
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.846 0.720
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.843 0.520
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01043.1 bHLH 290 339

Links

Other bHLH family TFs
Other Eucalyptus grandis TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_045200 Trichomonas vaginalis TVAG_045200 N
TVAG_051480 Trichomonas vaginalis TVAG_051480 N
TVAG_107290 Trichomonas vaginalis TVAG_107290 N
TVAG_207690 Trichomonas vaginalis TVAG_207690 N
TVAG_231940 Trichomonas vaginalis TVAG_231940 N
TVAG_385670 Trichomonas vaginalis TVAG_385670 N
TVAG_469770 Trichomonas vaginalis TVAG_469770 N
TVAG_591060 Trichomonas vaginalis TVAG_591060 N
TVAG_601820 Trichomonas vaginalis TVAG_601820 N