CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G230000
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.009G230000
T050073_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G230000.1
bHLH
37
86
ACKSHKEAERRRRQRINAHFSTLRSVLPNTTKTDKASLLAEVVHHVRELK
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_5.128
Carica papaya
evm.TU.supercontig_5.128
N
0.000
cassava37607.valid.m1
Manihot esculenta
cassava37607.valid.m1
N
0.000
Cucsa.200310
Cucumis sativus
Cucsa.200310
N
0.000
Cucsa.378840
Cucumis sativus
Cucsa.378840
N
0.000
mgf023930m
Mimulus guttatus
mgf023930m
N
0.000
Aquca_009_01064
Aquilegia coerulea
Aquca_009_01064
N
0.000
Bostr.27991s0138
Boechera stricta
Bostr.27991s0138
N
0.000
Cagra.15046s0001
Capsella grandiflora
Cagra.15046s0001
N
0.000
Carubv10024278m.g
Capsella rubella
Carubv10024278m.g
N
0.000
Ciclev10012712m.g
Citrus clementina
Ciclev10012712m.g
N
0.000
Eucgr.A01594
Eucalyptus grandis
Eucgr.A01594
N
0.000
Eucgr.B03915
Eucalyptus grandis
Eucgr.B03915
N
0.000
evm.TU.supercontig_30.61
Carica papaya
evm.TU.supercontig_30.61
N
0.000
cassava28497.m1
Manihot esculenta
cassava28497.m1
N
0.000
gene00954-v1.0-hybrid
Fragaria vesca
gene00954-v1.0-hybrid
N
0.000
Gorai.001G117900
Gossypium raimondii
Gorai.001G117900
N
0.000
Gorai.006G159900
Gossypium raimondii
Gorai.006G159900
N
0.000
Lus10027735.g
Linum usitatissimum
Lus10027735.g
N
0.000
Lus10035554.g
Linum usitatissimum
Lus10035554.g
N
0.000
orange1.1g027730m.g
Citrus sinensis
orange1.1g027730m.g
N
0.000
orange1.1g028583m.g
Citrus sinensis
orange1.1g028583m.g
N
0.000
SapurV1A.0226s0270
Salix purpurea
SapurV1A.0226s0270
N
0.000
SapurV1A.0288s0160
Salix purpurea
SapurV1A.0288s0160
N
0.000
SapurV1A.0360s0060
Salix purpurea
SapurV1A.0360s0060
N
0.000
Thhalv10017279m.g
Eutrema salsugineum
Thhalv10017279m.g
N
0.000
PK29286.1
Cannabis sativa
PK29286.1
N
0.000
POPTR_0001s21990
Populus trichocarpa
POPTR_0001s21990
N
0.000
Bo4g164920
Brassica oleracea
Bo4g164920
N
0.000
Bra011992
Brassica rapa
Bra011992
N
0.000
Bra034379
Brassica rapa
Bra034379
N
0.000
GLYMA03G34530
Glycine max
GLYMA03G34530
N
0.000
GLYMA10G07240
Glycine max
GLYMA10G07240
N
0.000
GLYMA13G21140
Glycine max
GLYMA13G21140
N
0.000
GLYMA19G37220
Glycine max
GLYMA19G37220
N
0.000
GSMUA_Achr5G03420_001
Musa acuminata
GSMUA_Achr5G03420_001
N
0.000
MTR_1g062160
Medicago truncatula
MTR_1g062160
N
0.000
MTR_7g102790
Medicago truncatula
MTR_7g102790
N
0.000
PGSC0003DMG400008598
Solanum tuberosum
PGSC0003DMG400008598
N
0.000
POPTR_0001s02390
Populus trichocarpa
POPTR_0001s02390
N
0.000
AT2G27930
Arabidopsis thaliana
AT2G27930
N
0.000
POPTR_0003s09160
Populus trichocarpa
POPTR_0003s09160
N
0.000
POPTR_0009s00830
Populus trichocarpa
POPTR_0009s00830
N
0.000
POPTR_0016s10920
Populus trichocarpa
POPTR_0016s10920
N
0.000
Solyc10g085800.1
Solanum lycopersicum
Solyc10g085800.1
N
0.000
TCM_041560
Theobroma cacao
TCM_041560
N
0.000
VIT_08s0007g04560
Vitis vinifera
VIT_08s0007g04560
N
0.000
Ca_00735
Cicer arietinum
Ca_00735
N
0.000
Ca_19047
Cicer arietinum
Ca_19047
N
0.000
Cla001071
Citrullus lanatus
Cla001071
N
0.000
29589.m001281
Ricinus communis
29589.m001281
N
0.000
30054.m000824
Ricinus communis
30054.m000824
N
0.000