LCUP008813 (Lucilia cuprina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LCUP008813 T051454_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E(spl)m3-HLH
M03596_2.00 		Drosophila melanogaster
DTGGCACGTGCCAH
DTGGCACGTGCCAH		 SELEX
Nitta et al.(2015)
HLHm3_1 		0.914 0.982
E(spl)m3-HLH
M05939_2.00 		Drosophila melanogaster
CACGTGVCA
TGBCACGTG		 B1H
Zhu et al.(2011)
HLHm3_SANGER_5_FBgn0002609 		0.914 0.982
E(spl)mbeta-HLH
M03597_2.00 		Drosophila melanogaster
HGGCACGTGCCR
YGGCACGTGCCD		 SELEX
Nitta et al.(2015)
HLHmbeta_1 		0.890 0.891
E(spl)mbeta-HLH
M05945_2.00 		Drosophila melanogaster
CRCGTGCC
GGCACGYG		 B1H
Zhu et al.(2011)
HLHmbeta_SANGER_10_FBgn0002733 		0.890 0.891
E(spl)mgamma-HLH
M03599_2.00 		Drosophila melanogaster
DTGGCACGTGCCAH
DTGGCACGTGCCAH		 SELEX
Nitta et al.(2015)
HLHmgamma_1 		0.852 0.855
E(spl)mgamma-HLH
M05947_2.00 		Drosophila melanogaster
SCACGTGCCA
TGGCACGTGS		 B1H
Zhu et al.(2011)
HLHmgamma_SANGER_10_FBgn0002735 		0.852 0.855
E(spl)mgamma-HLH
M05948_2.00 		Drosophila melanogaster
CTTGACW
WGTCAAG		 B1H
Zhu et al.(2011)
HLHmgamma_SANGER_5_2_FBgn0002735 		0.852 0.855
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP008813-PA bHLH 12 69

Links

Other bHLH family TFs
Other Lucilia cuprina TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_10169 Phytophthora parasitica F443_10169 N
fgenesh_scip_prom.28083.659 Phytophthora lateralis fgenesh_scip_prom.28083.659 N
fgenesh_scip_prom.46568.9634 Phytophthora kernoviae fgenesh_scip_prom.46568.9634 N
maker-pir_contig_2201-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2201-fgenesh-gene-0.0 N
maker-pir_contig_723-snap-gene-0.9 Pythium irregulare maker-pir_contig_723-snap-gene-0.9 N
Phyra76424 Phytophthora ramorum Phyra76424 N
PYU1_G008755 Pythium ultimum PYU1_G008755 N
PYU1_G008757 Pythium ultimum PYU1_G008757 N
snap_masked-pve_contig_11-abinit-gene-0.108 Pythium vexans snap_masked-pve_contig_11-abinit-gene-0.108 N
e_gw1.34.32.1 Phytophthora capsici e_gw1.34.32.1 N