bhlhe40.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-865608 T051892_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.890 0.944
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.890 0.944
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.890 0.944
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.890 0.944
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.890 0.944
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.890 0.944
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.890 0.944
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.890 0.944
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.890 0.944
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.890 0.944
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.890 0.944
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.890 0.944
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.890 0.944
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.890 0.944
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.890 0.944
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.890 0.926
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.890 0.926
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.890 0.926
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.890 0.926
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.890 0.926
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.890 0.926
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.890 0.926
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH73563 bHLH 96 150
AAI23309 bHLH 96 150

Links

Other bHLH family TFs
Other Xenopus laevis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STP1 Saccharomyces cerevisiae YDR463W D
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I
Kwal_18337 Kluyveromyces waltii Kwal_18337 I
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I
5542_YDR463W Saccharomyces paradoxus 5542_YDR463W I
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I
23216_YHR006W Saccharomyces bayanus 23216_YHR006W I
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I
SU7_2774 Saccharomyces arboricola SU7_2774 I
SU7_1409 Saccharomyces arboricola SU7_1409 I
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I
KLLA0_F10109g Kluyveromyces lactis KLLA0_F10109g I
KAFR_0C05710 Kazachstania africana KAFR_0C05710 I
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I
CAGL0E04312g Candida glabrata CAGL0E04312g I
AGOS_AFR531W Ashbya gossypii AGOS_AFR531W I
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I
AACERI_AaceriAFR531W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR531W I
NCAS_0A07900 Naumovozyma castellii NCAS_0A07900 N
YALI0_E24937g Yarrowia lipolytica YALI0_E24937g N
Scas_Contig660.12 Saccharomyces castellii Scas_Contig660.12 N