hif1a (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-946622 T051920_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.914 0.904
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.914 0.904
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.914 0.904
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.914 0.904
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.914 0.904
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.914 0.904
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.914 0.904
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.914 0.904
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.914 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH84989 bHLH 18 69

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HIF1A Homo sapiens ENSG00000100644 D 0.914
Hif1a Mus musculus ENSMUSG00000021109 D 0.914
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.857
ABF71072 Xenopus laevis ABF71072 I 0.914
AAO72733 Xenopus laevis AAO72733 I 0.914
AAI26006 Xenopus laevis AAI26006 I 0.914
e_gw.35.42.1 Branchiostoma floridae e_gw.35.42.1 I 0.845
e_gw.35.150.1 Branchiostoma floridae e_gw.35.150.1 I 0.845
Tal_R011146 Tyto alba Tal_R011146 I 0.857
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.857
Gfo_R006824 Geospiza fortis Gfo_R006824 I 0.857
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.857
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.857
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.857
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.857
Aan_R001655 Calypte anna Aan_R001655 I 0.857
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.857
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.857
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.882
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.857
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.846
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.882
HIF1A Meleagris gallopavo ENSMGAG00000013552 I 0.857
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.882
HIF1A Gallus gallus ENSGALG00000011870 I 0.857
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.857
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.857
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.858