CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB00810.1
(
Alternaria brassicicola
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
AB00810.1
T051992_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.889
0.909
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.884
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB00810.1
bHLH
305
378
KKTAHNMIEKRYRTNLNDKIAALRDSVPSLRVMSRPNGTEEDDDPEDLEGLTPAHKLNKATVLSKATEYIRHLE
Links
Other
bHLH
family TFs
Other
Alternaria brassicicola
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
TCM_022676
Theobroma cacao
TCM_022676
N
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
MDP0000252435
Malus domestica
MDP0000252435
N
PK29014.1
Cannabis sativa
PK29014.1
N