SMTD_0000281901 (Schistosoma mattheei)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMTD_0000281901 T054908_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.914 0.944
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.914 0.944
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.914 0.944
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.914 0.944
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.914 0.944
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.914 0.926
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.914 0.926
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.914 0.926
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.914 0.926
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.890 0.944
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.890 0.944
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.890 0.944
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.890 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000281901-mRNA-1 bHLH 105 158

Links

Other bHLH family TFs
Other Schistosoma mattheei TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.000
Pavir.J32630 Panicum virgatum Pavir.J32630 N 0.000
Pavir.J05000 Panicum virgatum Pavir.J05000 N 0.000
Pavir.Ga01170 Panicum virgatum Pavir.Ga01170 N 0.000
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.000
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.000
Traes_5DS_E9D675FAC Triticum aestivum Traes_5DS_E9D675FAC N 0.000
Traes_5DL_FC7D15A05 Triticum aestivum Traes_5DL_FC7D15A05 N 0.000
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.000
Traes_2DL_F37E51175 Triticum aestivum Traes_2DL_F37E51175 N 0.000
Traes_1DL_DD0FCDF93 Triticum aestivum Traes_1DL_DD0FCDF93 N 0.000
BRADI2G37795 Brachypodium distachyon BRADI2G37795 N 0.000
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.000
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.000
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.000
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.000
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.000
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.000
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.000
Sb02g005850 Sorghum bicolor Sb02g005850 N 0.000
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.000
Sb01g016055 Sorghum bicolor Sb01g016055 N 0.000