CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf22292-processed-gene-0.2
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
snap_masked-nMf.1.1.scaf22292-processed-gene-0.2
T054956_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf22292-processed-gene-0.2-mRNA-1
bHLH
73
105
RRTAHNLIEKKYRCSINDRINQLKEMLATEDNT
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.000
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.000
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.000
OB03G38320
Oryza brachyantha
OB03G38320
I
0.000
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.000
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.000
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.000
AC234521.1_FG006
Zea mays
AC234521.1_FG006
N
0.000
GRMZM2G088440
Zea mays
GRMZM2G088440
N
0.000
GRMZM2G135461
Zea mays
GRMZM2G135461
N
0.000
GRMZM2G359599
Zea mays
GRMZM2G359599
N
0.000
GRMZM2G414114
Zea mays
GRMZM2G414114
N
0.000
GRMZM2G424261
Zea mays
GRMZM2G424261
N
0.000
GRMZM2G458087
Zea mays
GRMZM2G458087
N
0.000
Traes_2BS_03909B330
Triticum aestivum
Traes_2BS_03909B330
N
0.000
Traes_2DS_4C8E5F416
Triticum aestivum
Traes_2DS_4C8E5F416
N
0.000