CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000064401
(
Trichuris trichiura
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
TTRE_0000064401
T055956_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000064401
Brinker
2
51
TQRSYEAGFKLEVVEMAKESNNAQAARKYRITRKMVTDWRKQEEALKMMP
Links
Other
Brinker
family TFs
Other
Trichuris trichiura
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC03G34450
Oryza punctata
OPUNC03G34450
N
Pavir.J21465
Panicum virgatum
Pavir.J21465
N
Pavir.J01091
Panicum virgatum
Pavir.J01091
N
Traes_5DL_743B870D9
Triticum aestivum
Traes_5DL_743B870D9
N
Traes_5BL_F367A99A7
Triticum aestivum
Traes_5BL_F367A99A7
N
Traes_5AL_04D3E97F0
Triticum aestivum
Traes_5AL_04D3E97F0
N
Si035062m.g
Setaria italica
Si035062m.g
N
Sb01g005170
Sorghum bicolor
Sb01g005170
N
OS03G0796900
Oryza sativa
OS03G0796900
N
ORUFI03G38970
Oryza rufipogon
ORUFI03G38970
N
BGIOSGA009643
Oryza indica
BGIOSGA009643
N
ONIVA03G38710
Oryza nivara
ONIVA03G38710
N
OMERI03G34530
Oryza meridionalis
OMERI03G34530
N
OGLUM03G37110
Oryza glumaepatula
OGLUM03G37110
N
OB03G44270
Oryza brachyantha
OB03G44270
N
MLOC_69270
Hordeum vulgare
MLOC_69270
N
LPERR03G31620
Leersia perrieri
LPERR03G31620
N
GRMZM2G019446
Zea mays
GRMZM2G019446
N
GRMZM2G016150
Zea mays
GRMZM2G016150
N
BRADI1G05480
Brachypodium distachyon
BRADI1G05480
N