CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00347
(
Verticillium albo atrum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
VDBG_00347
T056303_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04211
M01150_2.00
Neurospora crassa
NNNHTTACKWAN
NTWMGTAADNNN
PBM
Lambert et al.(2019)
pTH9679
0.870
0.717
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_00347T0
bZIP
81
140
VLSRRRAQNRASQRAYRERKDQRIKDLELLLSEQKEKSESLGQAYANLHAEYSKLRAMQS
Links
Other
bZIP
family TFs
Other
Verticillium albo atrum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028099
Oryza indica
BGIOSGA028099
N
ONIVA08G04740
Oryza nivara
ONIVA08G04740
N
OPUNC08G04700
Oryza punctata
OPUNC08G04700
N
ORUFI08G05400
Oryza rufipogon
ORUFI08G05400
N
OS08G0180500
Oryza sativa
OS08G0180500
N
Traes_4BL_73A9D9B09
Triticum aestivum
Traes_4BL_73A9D9B09
N