CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA026428
(
Oryza indica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BGIOSGA026428
T057162_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.790
0.840
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.790
0.840
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.790
0.840
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.788
0.900
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.788
0.900
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN
NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.788
0.900
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA
TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.788
0.900
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.788
0.900
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.788
0.900
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.788
0.900
HBP1B_WHEAT
M10043_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.788
0.900
TGA2
M09917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.788
0.900
TGA2
M09918_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.788
0.900
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.788
0.880
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.788
0.880
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.788
0.880
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.788
0.880
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA026428-PA
bZIP
47
96
MDQKTMRRLAQNREAARKSRLRKKAYVQQLESSKLKLAQLEQELQKARQQ
Links
Other
bZIP
family TFs
Other
Oryza indica
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF094
Arabidopsis thaliana
AT1G06160
D
0.000
P93392_TOBAC
Nicotiana tabacum
P93392_TOBAC
D
0.000
AMTR_s00009p00143340
Amborella trichopoda
AMTR_s00009p00143340
I
0.000
BGIOSGA031313
Oryza indica
BGIOSGA031313
I
0.000
Bo5g007280
Brassica oleracea
Bo5g007280
I
0.000
Bo8g114710
Brassica oleracea
Bo8g114710
I
0.000
Bra015478
Brassica rapa
Bra015478
I
0.000
Bra032433
Brassica rapa
Bra032433
I
0.000
BRADI1G00670
Brachypodium distachyon
BRADI1G00670
I
0.000
BRADI3G27690
Brachypodium distachyon
BRADI3G27690
I
0.000
BRADI4G38930
Brachypodium distachyon
BRADI4G38930
I
0.000
F775_01857
Aegilops tauschii
F775_01857
I
0.000
F775_22020
Aegilops tauschii
F775_22020
I
0.000
F775_25471
Aegilops tauschii
F775_25471
I
0.000
F775_52314
Aegilops tauschii
F775_52314
I
0.000
ORA59
Arabidopsis lyrata
fgenesh2_kg.1__587__AT1G06160.1
I
0.000
GLYMA02G00870
Glycine max
GLYMA02G00870
I
0.000
GLYMA03G31940
Glycine max
GLYMA03G31940
I
0.000
GLYMA10G00980
Glycine max
GLYMA10G00980
I
0.000
GLYMA10G04170
Glycine max
GLYMA10G04170
I
0.000
GLYMA10G04210
Glycine max
GLYMA10G04210
I
0.000
GLYMA10G33060
Glycine max
GLYMA10G33060
I
0.000
GLYMA13G18370
Glycine max
GLYMA13G18370
I
0.000
GLYMA13G18410
Glycine max
GLYMA13G18410
I
0.000
GLYMA19G34670
Glycine max
GLYMA19G34670
I
0.000
GLYMA19G34696
Glycine max
GLYMA19G34696
I
0.000
GLYMA19G43815
Glycine max
GLYMA19G43815
I
0.000
GLYMA20G34570
Glycine max
GLYMA20G34570
I
0.000
GRMZM2G073258
Zea mays
GRMZM2G073258
I
0.000
GRMZM2G123119
Zea mays
GRMZM2G123119
I
0.000
GRMZM2G381441
Zea mays
GRMZM2G381441
I
0.000
GRMZM2G478965
Zea mays
GRMZM2G478965
I
0.000
GRMZM5G837876
Zea mays
GRMZM5G837876
I
0.000
GSMUA_Achr11G22020_001
Musa acuminata
GSMUA_Achr11G22020_001
I
0.000
GSMUA_Achr1G01380_001
Musa acuminata
GSMUA_Achr1G01380_001
I
0.000
GSMUA_Achr3G15550_001
Musa acuminata
GSMUA_Achr3G15550_001
I
0.000
GSMUA_Achr4G05520_001
Musa acuminata
GSMUA_Achr4G05520_001
I
0.000
GSMUA_Achr4G12060_001
Musa acuminata
GSMUA_Achr4G12060_001
I
0.000
GSMUA_Achr5G19610_001
Musa acuminata
GSMUA_Achr5G19610_001
I
0.000
GSMUA_Achr6G27040_001
Musa acuminata
GSMUA_Achr6G27040_001
I
0.000
GSMUA_AchrUn_randomG10760_001
Musa acuminata
GSMUA_AchrUn_randomG10760_001
I
0.000
LPERR09G16380
Leersia perrieri
LPERR09G16380
I
0.000
MLOC_43207
Hordeum vulgare
MLOC_43207
I
0.000
MLOC_77420
Hordeum vulgare
MLOC_77420
I
0.000
MLOC_80197
Hordeum vulgare
MLOC_80197
I
0.000
MTR_1g043350
Medicago truncatula
MTR_1g043350
I
0.000
MTR_1g069940
Medicago truncatula
MTR_1g069940
I
0.000
MTR_1g069945
Medicago truncatula
MTR_1g069945
I
0.000
MTR_1g074370
Medicago truncatula
MTR_1g074370
I
0.000
MTR_4g054360
Medicago truncatula
MTR_4g054360
I
0.000
MTR_4g054740
Medicago truncatula
MTR_4g054740
I
0.000
MTR_4g054860
Medicago truncatula
MTR_4g054860
I
0.000
MTR_7g096780
Medicago truncatula
MTR_7g096780
I
0.000
OB09G27130
Oryza brachyantha
OB09G27130
I
0.000
OBART09G20410
Oryza barthii
OBART09G20410
I
0.000
OGLUM09G21150
Oryza glumaepatula
OGLUM09G21150
I
0.000
OLONG_005597
Oryza longistaminata
OLONG_005597
I
0.000
ONIVA09G20840
Oryza nivara
ONIVA09G20840
I
0.000
OPUNC03G38860
Oryza punctata
OPUNC03G38860
I
0.000
OPUNC09G18690
Oryza punctata
OPUNC09G18690
I
0.000
ORUFI09G22040
Oryza rufipogon
ORUFI09G22040
I
0.000
OS09G0572000
Oryza sativa
OS09G0572000
I
0.000
POPTR_0002s04010
Populus trichocarpa
POPTR_0002s04010
I
0.000
POPTR_0002s04020
Populus trichocarpa
POPTR_0002s04020
I
0.000
POPTR_0005s24460
Populus trichocarpa
POPTR_0005s24460
I
0.000
POPTR_0008s16610
Populus trichocarpa
POPTR_0008s16610
I
0.000
POPTR_0010s08300
Populus trichocarpa
POPTR_0010s08300
I
0.000
POPTR_0011s06010
Populus trichocarpa
POPTR_0011s06010
I
0.000
POPTR_0013s04240
Populus trichocarpa
POPTR_0013s04240
I
0.000
POPTR_0019s03170
Populus trichocarpa
POPTR_0019s03170
I
0.000
POPTR_0102s00200
Populus trichocarpa
POPTR_0102s00200
I
0.000
PRUPE_ppa023839mg
Prunus persica
PRUPE_ppa023839mg
I
0.000
PRUPE_ppa024173mg
Prunus persica
PRUPE_ppa024173mg
I
0.000
Sb01g000352
Sorghum bicolor
Sb01g000352
I
0.000
Sb02g012630
Sorghum bicolor
Sb02g012630
I
0.000
Sb05g026843
Sorghum bicolor
Sb05g026843
I
0.000
SELMODRAFT_37123
Selaginella moellendorffii
SELMODRAFT_37123
I
0.000
SELMODRAFT_80895
Selaginella moellendorffii
SELMODRAFT_80895
I
0.000
Si027485m.g
Setaria italica
Si027485m.g
I
0.000
Si028088m.g
Setaria italica
Si028088m.g
I
0.000
Si028135m.g
Setaria italica
Si028135m.g
I
0.000
Si028219m.g
Setaria italica
Si028219m.g
I
0.000
Si031946m.g
Setaria italica
Si031946m.g
I
0.000
Si038911m.g
Setaria italica
Si038911m.g
I
0.000
TCM_004052
Theobroma cacao
TCM_004052
I
0.000
TCM_004056
Theobroma cacao
TCM_004056
I
0.000
TCM_020871
Theobroma cacao
TCM_020871
I
0.000
TCM_026233
Theobroma cacao
TCM_026233
I
0.000
TCM_026234
Theobroma cacao
TCM_026234
I
0.000
Traes_1BL_8E4911A3C
Triticum aestivum
Traes_1BL_8E4911A3C
I
0.000
Traes_2BL_0B09B840B
Triticum aestivum
Traes_2BL_0B09B840B
I
0.000
Traes_2BS_0EE99D4A6
Triticum aestivum
Traes_2BS_0EE99D4A6
I
0.000
Traes_4AL_1A0E673DC
Triticum aestivum
Traes_4AL_1A0E673DC
I
0.000
Traes_4AL_5E86DF14B
Triticum aestivum
Traes_4AL_5E86DF14B
I
0.000
Traes_4AS_9450AD3F4
Triticum aestivum
Traes_4AS_9450AD3F4
I
0.000
Traes_4BL_39AE2989D
Triticum aestivum
Traes_4BL_39AE2989D
I
0.000
Traes_4DS_9C01B536B
Triticum aestivum
Traes_4DS_9C01B536B
I
0.000
Traes_5BL_4E044468C
Triticum aestivum
Traes_5BL_4E044468C
I
0.000
Traes_5DL_53D8DF9CD
Triticum aestivum
Traes_5DL_53D8DF9CD
I
0.000
TRIUR3_16508
Triticum urartu
TRIUR3_16508
I
0.000
TRIUR3_29784
Triticum urartu
TRIUR3_29784
I
0.000
VIT_05s0049g00510
Vitis vinifera
VIT_05s0049g00510
I
0.000
VIT_07s0005g03230
Vitis vinifera
VIT_07s0005g03230
I
0.000
VIT_07s0005g03260
Vitis vinifera
VIT_07s0005g03260
I
0.000
VIT_07s0005g03270
Vitis vinifera
VIT_07s0005g03270
I
0.000
VIT_14s0081g00730
Vitis vinifera
VIT_14s0081g00730
I
0.000
Ca_07754
Cicer arietinum
Ca_07754
I
0.000
Ca_12081
Cicer arietinum
Ca_12081
I
0.000
Ca_12219
Cicer arietinum
Ca_12219
I
0.000
Ca_12221
Cicer arietinum
Ca_12221
I
0.000
Ca_23170
Cicer arietinum
Ca_23170
I
0.000
Cla006080
Citrullus lanatus
Cla006080
I
0.000
Cla007697
Citrullus lanatus
Cla007697
I
0.000
Cla015066
Citrullus lanatus
Cla015066
I
0.000
Cla021850
Citrullus lanatus
Cla021850
I
0.000
Pm009382
Prunus mume
Pm009382
I
0.000
Pm020604
Prunus mume
Pm020604
I
0.000
29584.m000234
Ricinus communis
29584.m000234
I
0.000
29680.m001678
Ricinus communis
29680.m001678
I
0.000
29895.m000321
Ricinus communis
29895.m000321
I
0.000
29900.m001561
Ricinus communis
29900.m001561
I
0.000
cassava22677.valid.m1
Manihot esculenta
cassava22677.valid.m1
I
0.000
cassava37347.valid.m1
Manihot esculenta
cassava37347.valid.m1
I
0.000
cassava38166.valid.m1
Manihot esculenta
cassava38166.valid.m1
I
0.000
cassava38509.m1
Manihot esculenta
cassava38509.m1
I
0.000
cassava47179.m1
Manihot esculenta
cassava47179.m1
I
0.000
cassava632.valid.m1
Manihot esculenta
cassava632.valid.m1
I
0.000
Cucsa.053560
Cucumis sativus
Cucsa.053560
I
0.000
Cucsa.062330
Cucumis sativus
Cucsa.062330
I
0.000
Cucsa.255340
Cucumis sativus
Cucsa.255340
I
0.000
Cucsa.388530
Cucumis sativus
Cucsa.388530
I
0.000
mgf018693m
Mimulus guttatus
mgf018693m
I
0.000
mgf022372m
Mimulus guttatus
mgf022372m
I
0.000
mgf023600m
Mimulus guttatus
mgf023600m
I
0.000
mgf023779m
Mimulus guttatus
mgf023779m
I
0.000
Aquca_017_00711
Aquilegia coerulea
Aquca_017_00711
I
0.000
Aquca_034_00376
Aquilegia coerulea
Aquca_034_00376
I
0.000
Bostr.15774s0262
Boechera stricta
Bostr.15774s0262
I
0.000
Bostr.25219s0341
Boechera stricta
Bostr.25219s0341
I
0.000
Cagra.1671s0247
Capsella grandiflora
Cagra.1671s0247
I
0.000
Carubv10010105m.g
Capsella rubella
Carubv10010105m.g
I
0.000
Carubv10014873m.g
Capsella rubella
Carubv10014873m.g
I
0.000
Ciclev10005820m.g
Citrus clementina
Ciclev10005820m.g
I
0.000
Ciclev10021622m.g
Citrus clementina
Ciclev10021622m.g
I
0.000
Ciclev10023286m.g
Citrus clementina
Ciclev10023286m.g
I
0.000
Ciclev10024142m.g
Citrus clementina
Ciclev10024142m.g
I
0.000
Eucgr.H03088
Eucalyptus grandis
Eucgr.H03088
I
0.000
Eucgr.K03266
Eucalyptus grandis
Eucgr.K03266
I
0.000
evm.TU.supercontig_162.25
Carica papaya
evm.TU.supercontig_162.25
I
0.000
evm.TU.supercontig_44.71
Carica papaya
evm.TU.supercontig_44.71
I
0.000
gene08077-v1.0-hybrid
Fragaria vesca
gene08077-v1.0-hybrid
I
0.000
gene11442-v1.0-hybrid
Fragaria vesca
gene11442-v1.0-hybrid
I
0.000
Gorai.001G176800
Gossypium raimondii
Gorai.001G176800
I
0.000
Gorai.001G252600
Gossypium raimondii
Gorai.001G252600
I
0.000
Gorai.001G253000
Gossypium raimondii
Gorai.001G253000
I
0.000
Gorai.001G253100
Gossypium raimondii
Gorai.001G253100
I
0.000
Gorai.004G057000
Gossypium raimondii
Gorai.004G057000
I
0.000
Gorai.005G049300
Gossypium raimondii
Gorai.005G049300
I
0.000
Gorai.007G145800
Gossypium raimondii
Gorai.007G145800
I
0.000
Gorai.007G281000
Gossypium raimondii
Gorai.007G281000
I
0.000
Gorai.010G156600
Gossypium raimondii
Gorai.010G156600
I
0.000
Gorai.011G173000
Gossypium raimondii
Gorai.011G173000
I
0.000
Gorai.013G186700
Gossypium raimondii
Gorai.013G186700
I
0.000
Gorai.013G186800
Gossypium raimondii
Gorai.013G186800
I
0.000
Lus10003562.g
Linum usitatissimum
Lus10003562.g
I
0.000
Lus10011829.g
Linum usitatissimum
Lus10011829.g
I
0.000
Lus10021193.g
Linum usitatissimum
Lus10021193.g
I
0.000
Lus10021873.g
Linum usitatissimum
Lus10021873.g
I
0.000
Lus10022015.g
Linum usitatissimum
Lus10022015.g
I
0.000
Lus10022935.g
Linum usitatissimum
Lus10022935.g
I
0.000
Lus10027469.g
Linum usitatissimum
Lus10027469.g
I
0.000
Lus10033885.g
Linum usitatissimum
Lus10033885.g
I
0.000
Lus10042557.g
Linum usitatissimum
Lus10042557.g
I
0.000
MDP0000127134
Malus domestica
MDP0000127134
I
0.000
MDP0000167207
Malus domestica
MDP0000167207
I
0.000
MDP0000187369
Malus domestica
MDP0000187369
I
0.000
MDP0000235313
Malus domestica
MDP0000235313
I
0.000
MDP0000246808
Malus domestica
MDP0000246808
I
0.000
MDP0000322279
Malus domestica
MDP0000322279
I
0.000
MDP0000447570
Malus domestica
MDP0000447570
I
0.000
MDP0000789227
Malus domestica
MDP0000789227
I
0.000
MDP0000855671
Malus domestica
MDP0000855671
I
0.000
MDP0000880063
Malus domestica
MDP0000880063
I
0.000
orange1.1g039409m.g
Citrus sinensis
orange1.1g039409m.g
I
0.000
orange1.1g039729m.g
Citrus sinensis
orange1.1g039729m.g
I
0.000
orange1.1g042174m.g
Citrus sinensis
orange1.1g042174m.g
I
0.000
orange1.1g047387m.g
Citrus sinensis
orange1.1g047387m.g
I
0.000
Pavir.Ba02781
Panicum virgatum
Pavir.Ba02781
I
0.000
Pavir.Bb00652
Panicum virgatum
Pavir.Bb00652
I
0.000
Pavir.Bb00653
Panicum virgatum
Pavir.Bb00653
I
0.000
Pavir.Ha00304
Panicum virgatum
Pavir.Ha00304
I
0.000
Pavir.Ha00307
Panicum virgatum
Pavir.Ha00307
I
0.000
Pavir.Ha01200
Panicum virgatum
Pavir.Ha01200
I
0.000
Pavir.Ha01264
Panicum virgatum
Pavir.Ha01264
I
0.000
Pavir.Hb01074
Panicum virgatum
Pavir.Hb01074
I
0.000
Pavir.Hb01336
Panicum virgatum
Pavir.Hb01336
I
0.000
Pavir.Ia00066
Panicum virgatum
Pavir.Ia00066
I
0.000
Pavir.J01078
Panicum virgatum
Pavir.J01078
I
0.000
Pavir.J02630
Panicum virgatum
Pavir.J02630
I
0.000
Pavir.J16149
Panicum virgatum
Pavir.J16149
I
0.000
Pavir.J17768
Panicum virgatum
Pavir.J17768
I
0.000
Pavir.J30299
Panicum virgatum
Pavir.J30299
I
0.000
Pavir.J37124
Panicum virgatum
Pavir.J37124
I
0.000
SapurV1A.0006s0840
Salix purpurea
SapurV1A.0006s0840
I
0.000
SapurV1A.0006s0850
Salix purpurea
SapurV1A.0006s0850
I
0.000
SapurV1A.0007s0980
Salix purpurea
SapurV1A.0007s0980
I
0.000
SapurV1A.0021s0980
Salix purpurea
SapurV1A.0021s0980
I
0.000
SapurV1A.0132s0310
Salix purpurea
SapurV1A.0132s0310
I
0.000
SapurV1A.0233s0360
Salix purpurea
SapurV1A.0233s0360
I
0.000
SapurV1A.0233s0370
Salix purpurea
SapurV1A.0233s0370
I
0.000
SapurV1A.0270s0240
Salix purpurea
SapurV1A.0270s0240
I
0.000
SapurV1A.0816s0060
Salix purpurea
SapurV1A.0816s0060
I
0.000
SapurV1A.2490s0030
Salix purpurea
SapurV1A.2490s0030
I
0.000
SapurV1A.3984s0010
Salix purpurea
SapurV1A.3984s0010
I
0.000
SapurV1A.4312s0010
Salix purpurea
SapurV1A.4312s0010
I
0.000
Thhalv10008518m.g
Eutrema salsugineum
Thhalv10008518m.g
I
0.000
PK23186.1
Cannabis sativa
PK23186.1
I
0.000
chr1.CM0295.160.nd
Lotus japonicus
chr1.CM0295.160.nd
I
0.000
chr4.CM0175.50.nd
Lotus japonicus
chr4.CM0175.50.nd
I
0.000
chr5.CM0341.90.nc
Lotus japonicus
chr5.CM0341.90.nc
I
0.000
chr6.CM1613.110.nc
Lotus japonicus
chr6.CM1613.110.nc
I
0.000
LjSGA_017232.1
Lotus japonicus
LjSGA_017232.1
I
0.000
F775_01237
Aegilops tauschii
F775_01237
N
0.000
F775_22648
Aegilops tauschii
F775_22648
N
0.000
Traes_2AL_9E90C2488
Triticum aestivum
Traes_2AL_9E90C2488
N
0.000
Traes_2BL_304012B04
Triticum aestivum
Traes_2BL_304012B04
N
0.000
Traes_2BL_3A3353970
Triticum aestivum
Traes_2BL_3A3353970
N
0.000