Bra001671 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra001671 T057397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HYH
M01132_2.00 		Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN		 PBM
Lambert et al.(2019)
pTH9959 		0.859 0.969
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001671.1-P bZIP 78 141

Links

Other bZIP family TFs
Other Brassica rapa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HYH Arabidopsis thaliana AT3G17609 D 0.859
Pm007163 Prunus mume Pm007163 I 0.790
Thhalv10021704m.g Eutrema salsugineum Thhalv10021704m.g I 0.859
SapurV1A.2641s0040 Salix purpurea SapurV1A.2641s0040 I 0.793
SapurV1A.1258s0140 Salix purpurea SapurV1A.1258s0140 I 0.793
SapurV1A.0264s0450 Salix purpurea SapurV1A.0264s0450 I 0.793
MDP0000834642 Malus domestica MDP0000834642 I 0.783
Eucgr.B02198 Eucalyptus grandis Eucgr.B02198 I 0.802
Cagra.4396s0065 Capsella grandiflora Cagra.4396s0065 I 0.859
Bostr.19424s0909 Boechera stricta Bostr.19424s0909 I 0.859
cassava328.valid.m1 Manihot esculenta cassava328.valid.m1 I 0.797
29889.m003420 Ricinus communis 29889.m003420 I 0.813
Ca_22618 Cicer arietinum Ca_22618 I 0.784
PRUPE_ppa011967mg Prunus persica PRUPE_ppa011967mg I 0.790
POPTR_0010s00680 Populus trichocarpa POPTR_0010s00680 I 0.790
GLYMA16G13570 Glycine max GLYMA16G13570 I 0.782
GLYMA03G18990 Glycine max GLYMA03G18990 I 0.782
HYH Arabidopsis lyrata fgenesh2_kg.3__1938__AT3G17609.2 I 0.859
Bra022225 Brassica rapa Bra022225 I 0.827
Bra021258 Brassica rapa Bra021258 I 0.847
Bo5g122830 Brassica oleracea Bo5g122830 I 0.809