Bra008670 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra008670 T057422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.879 0.823
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.879 0.823
OS02G0728001
M01826_2.00 		Oryza sativa
NHCACGTGKNN
NNMCACGTGDN		 PBM
Weirauch et al.(2014)
pTH8334 		0.782 0.597
OS02G0728001
M01827_2.00 		Oryza sativa
WSACGTGG
CCACGTSW		 PBM
Weirauch et al.(2014)
pTH8737 		0.782 0.597
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008670.1-P bZIP 70 131

Links

Other bZIP family TFs
Other Brassica rapa TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK15172.1 Cannabis sativa PK15172.1 D
OS02G0104500 Oryza sativa OS02G0104500 D
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I
29739.m003611 Ricinus communis 29739.m003611 I
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I
TRIUR3_30093 Triticum urartu TRIUR3_30093 I
TRIUR3_29570 Triticum urartu TRIUR3_29570 I
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I
PK14727.1 Cannabis sativa PK14727.1 I
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I
Pavir.J25029 Panicum virgatum Pavir.J25029 I
TCM_037381 Theobroma cacao TCM_037381 I
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I
MDP0000122269 Malus domestica MDP0000122269 I
Lus10028584.g Linum usitatissimum Lus10028584.g I
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I
OB02G10400 Oryza brachyantha OB02G10400 I
Si033157m.g Setaria italica Si033157m.g I
MLOC_74813 Hordeum vulgare MLOC_74813 I
MLOC_70549 Hordeum vulgare MLOC_70549 I
MLOC_25460 Hordeum vulgare MLOC_25460 I
MLOC_22988 Hordeum vulgare MLOC_22988 I
MLOC_14207 Hordeum vulgare MLOC_14207 I
LPERR02G00380 Leersia perrieri LPERR02G00380 I
MTR_2g026725 Medicago truncatula MTR_2g026725 I
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I
GRMZM2G111760 Zea mays GRMZM2G111760 I
GRMZM2G037128 Zea mays GRMZM2G037128 I
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I
Bo6g083670 Brassica oleracea Bo6g083670 I
BGIOSGA011584 Oryza indica BGIOSGA011584 I
BGIOSGA007300 Oryza indica BGIOSGA007300 I
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I
Sb04g000520 Sorghum bicolor Sb04g000520 I
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I
OBART02G00380 Oryza barthii OBART02G00380 I
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I
OPUNC02G00050 Oryza punctata OPUNC02G00050 I
ONIVA02G00390 Oryza nivara ONIVA02G00390 I
OMERI02G09240 Oryza meridionalis OMERI02G09240 I
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I
OBART10G15720 Oryza barthii OBART10G15720 I
PGSC0003DMG400013300 Solanum tuberosum PGSC0003DMG400013300 N
GLYMA15G12591 Glycine max GLYMA15G12591 N
MDP0000287231 Malus domestica MDP0000287231 N
MDP0000284819 Malus domestica MDP0000284819 N