CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fosaa
(
Gasterosteus aculeatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGACG00000007617
T059787_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOS
M04327_2.00
Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV
SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX
0.933
0.873
FOS
M08069_2.00
Homo sapiens
DVTGASTCATN
NATGASTCABH
ChIP-seq
Mathelier et al.(2014)
MA0476.1
0.933
0.873
FOS
M07826_2.00
Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford
0.933
0.873
FOS
M07827_2.00
Homo sapiens
MTGASTCAYHN
NDRTGASTCAK
ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD
0.933
0.873
FOS
M07828_2.00
Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV
ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago
0.933
0.873
FOS
M08802_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A
0.933
0.873
Fos
M08819_2.00
Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN
Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A
0.933
0.873
FOS
M09988_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q4
0.933
0.873
FOS
M09989_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q6
0.933
0.873
FOS
M09990_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_02
0.933
0.873
FOS
M09991_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_03
0.933
0.873
FOS
M04328_2.00
Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB
SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX
0.933
0.873
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.880
0.762
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.880
0.762
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.880
0.762
FOSB
M04272_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX
0.873
0.810
FOSB
M08795_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A
0.873
0.810
Fosb
M08814_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A
0.873
0.810
FOSB
M04273_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX
0.873
0.810
Fosl1
M01805_2.00
Mus musculus
NNRTGACKYMN
NKRMGTCAYNN
PBM
Weirauch et al.(2014)
pTH5077
0.812
0.698
FOSL1
M04333_2.00
Homo sapiens
NRTGAWTCAYN
NRTGAWTCAYN
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_1
0.812
0.698
FOSL1
M04334_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_2
0.812
0.698
FOSL1
M04335_2.00
Homo sapiens
DRTGAYRCR
YGYRTCAYH
SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_3
0.812
0.698
FOSL1
M04035_2.00
Homo sapiens
RTGACGTCAY
RTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.1
0.812
0.698
FOSL1
M04036_2.00
Homo sapiens
GTCAYCRRTGAC
GTCAYYGRTGAC
SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.2
0.812
0.698
FOSL1
M08071_2.00
Homo sapiens
DRTGASTCAKV
BMTGASTCAYH
ChIP-seq
Mathelier et al.(2014)
MA0477.1
0.812
0.698
FOSL1
M07833_2.00
Homo sapiens
NDRTGASTCAB
VTGASTCAYHN
ChIP-seq
Gerstein et al.(2012)
K562_FOSL1_HudsonAlpha
0.812
0.698
FOSL1
M08805_2.00
Homo sapiens
NVTGACTCABNN
NNVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL1_HUMAN.H11MO.0.A
0.812
0.698
Fosl1
M08821_2.00
Mus musculus
NVTGACTCABNN
NNVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL1_MOUSE.H11MO.0.A
0.812
0.698
FOSL1
M09490_2.00
Homo sapiens
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
BT549-Fra1_GSE46166
0.812
0.698
FOSL1
M10000_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOSL1_01
0.812
0.698
FOSL1
M10001_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q5
0.812
0.698
FOSL1
M10002_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q6_01
0.812
0.698
FOSL1
M10003_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FRA1_Q6
0.812
0.698
FOSL1
M04336_2.00
Homo sapiens
BRTGASTCATV
BATGASTCAYV
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_1
0.812
0.698
FOSL1
M04337_2.00
Homo sapiens
NRTSACGTCAYN
NRTGACGTSAYN
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_2
0.812
0.698
FOSL1
M04338_2.00
Homo sapiens
RATGAYRCR
YGYRTCATY
SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_3
0.812
0.698
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000010100
bZIP
109
171
EEEEKKRIRRERNKMAAAKCRNRRRELTDTLQTETDELEEEKAALETEIADLLKEKERLEFIL
Links
Other
bZIP
family TFs
Other
Gasterosteus aculeatus
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_081_00012
Aquilegia coerulea
Aquca_081_00012
I
0.000
BGIOSGA003013
Oryza indica
BGIOSGA003013
I
0.000
Si002517m.g
Setaria italica
Si002517m.g
I
0.000
TCM_029711
Theobroma cacao
TCM_029711
I
0.000
TRAES3BF011300020CFD_g
Triticum aestivum
TRAES3BF011300020CFD_g
I
0.000
VIT_14s0068g01580
Vitis vinifera
VIT_14s0068g01580
I
0.000
29900.m001610
Ricinus communis
29900.m001610
I
0.000
cassava18812.valid.m1
Manihot esculenta
cassava18812.valid.m1
I
0.000
cassava32077.m1
Manihot esculenta
cassava32077.m1
I
0.000
Sb03g001730
Sorghum bicolor
Sb03g001730
I
0.000
gene29828-v1.0-hybrid
Fragaria vesca
gene29828-v1.0-hybrid
I
0.000
Gorai.009G163400
Gossypium raimondii
Gorai.009G163400
I
0.000
MDP0000249969
Malus domestica
MDP0000249969
I
0.000
Pavir.Ea00157
Panicum virgatum
Pavir.Ea00157
I
0.000
Pavir.Eb00095
Panicum virgatum
Pavir.Eb00095
I
0.000
SapurV1A.1185s0010
Salix purpurea
SapurV1A.1185s0010
I
0.000
SapurV1A.1821s0030
Salix purpurea
SapurV1A.1821s0030
I
0.000
OS01G0218100
Oryza sativa
OS01G0218100
I
0.000
GRMZM2G016039
Zea mays
GRMZM2G016039
I
0.000
GRMZM2G166642
Zea mays
GRMZM2G166642
I
0.000
LPERR01G07000
Leersia perrieri
LPERR01G07000
I
0.000
MLOC_64390
Hordeum vulgare
MLOC_64390
I
0.000
OB01G17480
Oryza brachyantha
OB01G17480
I
0.000
OGLUM01G08450
Oryza glumaepatula
OGLUM01G08450
I
0.000
OMERI01G07330
Oryza meridionalis
OMERI01G07330
I
0.000
ONIVA01G09540
Oryza nivara
ONIVA01G09540
I
0.000
OPUNC01G07130
Oryza punctata
OPUNC01G07130
I
0.000
ORGLA01G0065100
Oryza glaberrima
ORGLA01G0065100
I
0.000
ORUFI01G08040
Oryza rufipogon
ORUFI01G08040
I
0.000
Bostr.20505s0075
Boechera stricta
Bostr.20505s0075
N
0.000
GSMUA_Achr3G03510_001
Musa acuminata
GSMUA_Achr3G03510_001
N
0.000
GSMUA_Achr2G20040_001
Musa acuminata
GSMUA_Achr2G20040_001
N
0.000
GSMUA_Achr10G14370_001
Musa acuminata
GSMUA_Achr10G14370_001
N
0.000
SapurV1A.0029s0640
Salix purpurea
SapurV1A.0029s0640
N
0.000
PRUPE_ppa021837mg
Prunus persica
PRUPE_ppa021837mg
N
0.000
BRADI2G07050
Brachypodium distachyon
BRADI2G07050
N
0.000