CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000014904
(
Gadus morhua
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGMOG00000014904
T059959_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf4
M00759_2.00
Mus musculus
NNNNKRCDHVHNN
NNDBDHGYMNNNN
PBM
Weirauch et al.(2013)
pTH1014
0.851
0.703
Atf4
M02865_2.00
Mus musculus
DRBATGAYGCAATM
KATTGCRTCATVYH
SELEX
Jolma et al.(2013)
Atf4_1
0.851
0.703
Atf4
M08833_2.00
Mus musculus
DNMTGATGCAAY
RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_MOUSE.H11MO.0.A
0.851
0.703
Atf4
M09496_2.00
Mus musculus
MTGATGYAAY
RTTRCATCAK
Misc
Heinz et al.(2010)
MEF-Atf4_GSE35681
0.851
0.703
ATF4
M02834_2.00
Homo sapiens
DNMTGAYGCAAYM
KRTTGCRTCAKNH
SELEX
Jolma et al.(2013)
ATF4_1
0.851
0.688
ATF4
M04274_2.00
Homo sapiens
RDATGACGTCATHY
RDATGACGTCATHY
SELEX
Yin et al.(2017)
ATF4_eDBD_HT-SELEX
0.851
0.688
ATF4
M04276_2.00
Homo sapiens
RKATGACGTCATMY
RKATGACGTCATMY
SELEX
Yin et al.(2017)
ATF4_FL_HT-SELEX
0.851
0.688
ATF4
M04027_2.00
Homo sapiens
VNATGACGTCABNY
RNVTGACGTCATNB
SELEX
Rodriguez-Martinez et al.(2017)
ATF4.1
0.851
0.688
ATF4
M08796_2.00
Homo sapiens
DNMTGATGCAAY
RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_HUMAN.H11MO.0.A
0.851
0.688
ATF4
M09963_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q2
0.851
0.688
ATF4
M09964_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q5
0.851
0.688
ATF4
M09965_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q6
0.851
0.688
ATF4
M04275_2.00
Homo sapiens
RKATGACATCATCY
RGATGATGTCATMY
SELEX
Yin et al.(2017)
ATF4_eDBD_Methyl-HT-SELEX
0.851
0.688
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000015964
bZIP
262
325
APKDKKLKKMEQNKTAATRYRQKKRVEQESLSTVYSNLERKNIELNEKADSMAREIQYLKELME
Links
Other
bZIP
family TFs
Other
Gadus morhua
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_08246
Coccidioides immitis
CIMG_08246
N
CIMG_13192
Coccidioides immitis
CIMG_13192
N
AUEXF2481DRAFT_112381
Aureobasidium subglaciale
AUEXF2481DRAFT_112381
N
CPC735_062170
Coccidioides posadasii
CPC735_062170
N
M437DRAFT_59053
Aureobasidium melanogenum
M437DRAFT_59053
N
M438DRAFT_299670
Aureobasidium pullulans
M438DRAFT_299670
N
PAAG_06315
Paracoccidioides sp lutzii
PAAG_06315
N
PABG_07664
Paracoccidioides brasiliensis
PABG_07664
N