CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TEF
(
Meleagris gallopavo
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMGAG00000012262
T060188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.891
0.969
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.891
0.969
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.891
0.969
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.891
0.969
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.891
0.969
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.891
0.969
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.891
0.969
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.891
0.969
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.891
0.969
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.847
0.781
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.847
0.781
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.847
0.781
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.847
0.781
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.847
0.781
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.847
0.781
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.847
0.781
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.847
0.781
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000012894
bZIP
215
278
QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGRCKNIVS
Links
Other
bZIP
family TFs
Other
Meleagris gallopavo
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HAND2
Homo sapiens
ENSG00000164107
D
HAND2
Taeniopygia guttata
ENSTGUG00000006281
I
PHUM088400
Pediculus humanus
PHUM088400
I
LotgiG104540
Lottia gigantea
LotgiG104540
I
L798_02599
Zootermopsis nevadensis
L798_02599
I
ISCW009436
Ixodes scapularis
ISCW009436
I
ENSXMAG00000015868
Xiphophorus maculatus
ENSXMAG00000015868
I
HAND2
Vicugna pacos
ENSVPAG00000006724
I
HAND2
Tursiops truncatus
ENSTTRG00000001365
I
hand2
Tetraodon nigroviridis
ENSTNIG00000005584
I
SMAR012521
Strigamia maritima
SMAR012521
I
HAND2
Tupaia belangeri
ENSTBEG00000007591
I
ENSSTOG00000023020
Ictidomys tridecemlineatus
ENSSTOG00000023020
I
ENSSSCG00000009703
Sus scrofa
ENSSSCG00000009703
I
ENSSHAG00000011188
Sarcophilus harrisii
ENSSHAG00000011188
I
HAND2
Pan troglodytes
ENSPTRG00000016601
I
ENSPPYG00000015208
Pongo abelii
ENSPPYG00000015208
I
ENSPFOG00000009546
Poecilia formosa
ENSPFOG00000009546
I
ENSPANG00000023378
Papio anubis
ENSPANG00000023378
I
estExt_fgenesh2_pm.C_20027
Branchiostoma floridae
estExt_fgenesh2_pm.C_20027
I
PPAI010228
Phlebotomus papatasi
PPAI010228
I
LLOJ007342
Lutzomyia longipalpis
LLOJ007342
I
hand2.L
Xenopus laevis
XB-GENE-865126
I
hand2.S
Xenopus laevis
XB-GENE-6252408
I
hand2
Xenopus tropicalis
XB-GENE-481426
I
HHAL010291-PA
Halyomorpha halys
HHAL010291-PA
I
Sakowv30003804m.g
Saccoglossus kowalevskii
Sakowv30003804m.g
I
Ocbimv22024043m.g
Octopus bimaculoides
Ocbimv22024043m.g
I
SMAR011914
Strigamia maritima
SMAR011914
I
e_gw.829.7.1
Branchiostoma floridae
e_gw.829.7.1
I
Ogr14661
Ophisaurus gracilis
Ogr14661
I
Gfo_R010505
Geospiza fortis
Gfo_R010505
I
ENSP00000352565-D1
Bos grunniens
ENSP00000352565-D1
I
Cmyd_10016492
Chelonia mydas
Cmyd_10016492
I
Alligator_sinensis_CCG007905.1
Alligator sinensis
Alligator_sinensis_CCG007905.1
I
Aan_R004859
Calypte anna
Aan_R004859
I
hand2
Oryzias latipes
ENSORLG00000010967
I
hand2
Danio rerio
ENSDARG00000008305
I
ENSGMOG00000018978
Gadus morhua
ENSGMOG00000018978
I
HAND2
Gorilla gorilla
ENSGGOG00000006147
I
hand2
Gasterosteus aculeatus
ENSGACG00000016418
I
HAND2
Felis catus
ENSFCAG00000031585
I
ENSFALG00000011490
Ficedula albicollis
ENSFALG00000011490
I
HAND2
Equus caballus
ENSECAG00000009657
I
Hand2
Dipodomys ordii
ENSDORG00000007304
I
HAND2
Dasypus novemcinctus
ENSDNOG00000035702
I
ENSLACG00000004329
Latimeria chalumnae
ENSLACG00000004329
I
ENSCSAG00000003094
Chlorocebus sabaeus
ENSCSAG00000003094
I
ENSCPOG00000001740
Cavia porcellus
ENSCPOG00000001740
I
HAND2
Callithrix jacchus
ENSCJAG00000005144
I
HAND2
Canis familiaris
ENSCAFG00000007858
I
HAND2
Bos taurus
ENSBTAG00000044123
I
ENSAMXG00000025833
Astyanax mexicanus
ENSAMXG00000025833
I
ENSAMEG00000014235
Ailuropoda melanoleuca
ENSAMEG00000014235
I
CGI_10023955
Crassostrea gigas
CGI_10023955
I
HAND2
Monodelphis domestica
ENSMODG00000003548
I
HAND2
Ochotona princeps
ENSOPRG00000010154
I
ENSONIG00000016059
Oreochromis niloticus
ENSONIG00000016059
I
HAND2
Otolemur garnettii
ENSOGAG00000027928
I
ENSOCUG00000016256
Oryctolagus cuniculus
ENSOCUG00000016256
I
ENSOARG00000015352
Ovis aries
ENSOARG00000015352
I
ENSNLEG00000006670
Nomascus leucogenys
ENSNLEG00000006670
I
Hand2
Mus musculus
ENSMUSG00000038193
I
ENSMPUG00000001909
Mustela putorius furo
ENSMPUG00000001909
I
ACYPI009244
Acyrthosiphon pisum
ACYPI009244
I
ENSMMUG00000018749
Macaca mulatta
ENSMMUG00000018749
I
HAND2
Myotis lucifugus
ENSMLUG00000002599
I
HAND2
Microcebus murinus
ENSMICG00000009054
I
ENSMEUG00000010715
Macropus eugenii
ENSMEUG00000010715
I
ENSLOCG00000013581
Lepisosteus oculatus
ENSLOCG00000013581
I
ENSLOCG00000012444
Lepisosteus oculatus
ENSLOCG00000012444
I
HAND2
Loxodonta africana
ENSLAFG00000029843
I