CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000007199
(
Poecilia formosa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPFOG00000007199
T061020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.837
0.812
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.837
0.812
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.834
0.609
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.826
0.797
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.826
0.797
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.826
0.797
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.826
0.797
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.826
0.797
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.826
0.797
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.826
0.797
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.826
0.797
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.803
0.594
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.803
0.594
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.803
0.594
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.803
0.594
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.803
0.594
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.803
0.594
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.803
0.594
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.803
0.594
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.803
0.594
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000007116
bZIP
25
88
SDDVKKVMRREKNRIAAQKSRMRQTQKADSLHLESENLEKENAALRKEVKQLTEEANYLSSVLS
Links
Other
bZIP
family TFs
Other
Poecilia formosa
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
SapurV1A.0033s0460
Salix purpurea
SapurV1A.0033s0460
N
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
Gorai.008G106100
Gossypium raimondii
Gorai.008G106100
N
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
cassava19916.m1
Manihot esculenta
cassava19916.m1
N
30174.m008828
Ricinus communis
30174.m008828
N
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
TCM_005571
Theobroma cacao
TCM_005571
N
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N