CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Fosb *(Rattus norvegicus)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00170 (bZIP_1)	IPR011616	ENSRNOG00000046667	T061333_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
FOSB M04272_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) FOSB_eDBD_HT-SELEX	0.916	1.000
FOSB M08795_2.00	Homo sapiens	VTGACTCAB	VTGAGTCAB	Misc Kulakovskiy et al.(2013) FOSB_HUMAN.H11MO.0.A	0.916	1.000
Fosb M08814_2.00	Mus musculus	VTGACTCAB	VTGAGTCAB	Misc Kulakovskiy et al.(2013) FOSB_MOUSE.H11MO.0.A	0.916	1.000
FOSB M04273_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) FOSB_eDBD_Methyl-HT-SELEX	0.916	1.000
Fosl2 M01809_2.00	Mus musculus	GATGACKH	DMGTCATC	PBM Weirauch et al.(2014) pTH5108	0.889	0.836
Fosl2 M08828_2.00	Mus musculus	NVTGACTCABN	NVTGAGTCABN	Misc Kulakovskiy et al.(2013) FOSL2_MOUSE.H11MO.0.A	0.889	0.836
Fosl2 M09494_2.00	Mus musculus	NNVTGASTCABN	NVTGASTCABNN	Misc Heinz et al.(2010) 3T3L1-Fosl2_GSE56872	0.889	0.836
FOS M04327_2.00	Homo sapiens	BRTGACGTCAYV	BRTGACGTCAYV	SELEX Yin et al.(2017) FOS_eDBD_HT-SELEX	0.884	0.820
FOS M08069_2.00	Homo sapiens	DVTGASTCATN	NATGASTCABH	ChIP-seq Mathelier et al.(2014) MA0476.1	0.884	0.820
FOS M07826_2.00	Homo sapiens	NATGASTCABDBN	NVHVTGASTCATN	ChIP-seq Gerstein et al.(2012) HeLa-S3_CFOS_Stanford	0.884	0.820
FOS M07827_2.00	Homo sapiens	MTGASTCAYHN	NDRTGASTCAK	ChIP-seq Gerstein et al.(2012) HUVEC_CFOS_UCD	0.884	0.820
FOS M07828_2.00	Homo sapiens	BDRTGASTCAYNBHB	VDVNRTGASTCAYHV	ChIP-seq Gerstein et al.(2012) K562_CFOS_UChicago	0.884	0.820
FOS M08802_2.00	Homo sapiens	VTGACTCAB	VTGAGTCAB	Misc Kulakovskiy et al.(2013) FOS_HUMAN.H11MO.0.A	0.884	0.820
Fos M08819_2.00	Mus musculus	NRTGACTCAYNN	NNRTGAGTCAYN	Misc Kulakovskiy et al.(2013) FOS_MOUSE.H11MO.0.A	0.884	0.820
FOS M09988_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CFOS_Q4	0.884	0.820
FOS M09989_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CFOS_Q6	0.884	0.820
FOS M09990_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOS_02	0.884	0.820
FOS M09991_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOS_03	0.884	0.820
FOS M04328_2.00	Homo sapiens	VATGACRTCAYM	KRTGAYGTCATB	SELEX Yin et al.(2017) FOS_eDBD_Methyl-HT-SELEX	0.884	0.820
Fosl1 M01805_2.00	Mus musculus	NNRTGACKYMN	NKRMGTCAYNN	PBM Weirauch et al.(2014) pTH5077	0.799	0.803
FOSL1 M04333_2.00	Homo sapiens	NRTGAWTCAYN	NRTGAWTCAYN	SELEX Yin et al.(2017) FOSL1_FL_HT-SELEX_1	0.799	0.803
FOSL1 M04334_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Yin et al.(2017) FOSL1_FL_HT-SELEX_2	0.799	0.803
FOSL1 M04335_2.00	Homo sapiens	DRTGAYRCR	YGYRTCAYH	SELEX Yin et al.(2017) FOSL1_FL_HT-SELEX_3	0.799	0.803
FOSL1 M04035_2.00	Homo sapiens	RTGACGTCAY	RTGACGTCAY	SELEX Rodriguez-Martinez et al.(2017) FOSL1.1	0.799	0.803
FOSL1 M04036_2.00	Homo sapiens	GTCAYCRRTGAC	GTCAYYGRTGAC	SELEX Rodriguez-Martinez et al.(2017) FOSL1.2	0.799	0.803
FOSL1 M08071_2.00	Homo sapiens	DRTGASTCAKV	BMTGASTCAYH	ChIP-seq Mathelier et al.(2014) MA0477.1	0.799	0.803
FOSL1 M07833_2.00	Homo sapiens	NDRTGASTCAB	VTGASTCAYHN	ChIP-seq Gerstein et al.(2012) K562_FOSL1_HudsonAlpha	0.799	0.803
FOSL1 M08805_2.00	Homo sapiens	NVTGACTCABNN	NNVTGAGTCABN	Misc Kulakovskiy et al.(2013) FOSL1_HUMAN.H11MO.0.A	0.799	0.803
Fosl1 M08821_2.00	Mus musculus	NVTGACTCABNN	NNVTGAGTCABN	Misc Kulakovskiy et al.(2013) FOSL1_MOUSE.H11MO.0.A	0.799	0.803
FOSL1 M09490_2.00	Homo sapiens	NNVTGASTCABN	NVTGASTCABNN	Misc Heinz et al.(2010) BT549-Fra1_GSE46166	0.799	0.803
FOSL1 M10000_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOSL1_01	0.799	0.803
FOSL1 M10001_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FRA1_Q5	0.799	0.803
FOSL1 M10002_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FRA1_Q6_01	0.799	0.803
FOSL1 M10003_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FRA1_Q6	0.799	0.803
FOSL1 M04336_2.00	Homo sapiens	BRTGASTCATV	BATGASTCAYV	SELEX Yin et al.(2017) FOSL1_FL_Methyl-HT-SELEX_1	0.799	0.803
FOSL1 M04337_2.00	Homo sapiens	NRTSACGTCAYN	NRTGACGTSAYN	SELEX Yin et al.(2017) FOSL1_FL_Methyl-HT-SELEX_2	0.799	0.803
FOSL1 M04338_2.00	Homo sapiens	RATGAYRCR	YGYRTCATY	SELEX Yin et al.(2017) FOSL1_FL_Methyl-HT-SELEX_3	0.799	0.803
Atf3 M03648_2.00	Drosophila melanogaster	NRTKACGTMAYN	NRTKACGTMAYN	SELEX Nitta et al.(2015) Atf3_1	0.783	0.426
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSRNOP00000065427	bZIP	153	213	EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEF

Links
Other bZIP family TFs
Other *Rattus norvegicus* TFs

292 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
OS01G0196300	Oryza sativa	OS01G0196300	N	0.000
OMERI01G18730	Oryza meridionalis	OMERI01G18730	N	0.000
ONIVA01G07080	Oryza nivara	ONIVA01G07080	N	0.000
ONIVA01G07190	Oryza nivara	ONIVA01G07190	N	0.000
OPUNC01G20610	Oryza punctata	OPUNC01G20610	N	0.000
ORGLA01G0058200	Oryza glaberrima	ORGLA01G0058200	N	0.000
ORGLA01G0397100	Oryza glaberrima	ORGLA01G0397100	N	0.000
ORGLA08G0199700	Oryza glaberrima	ORGLA08G0199700	N	0.000
ORUFI01G06710	Oryza rufipogon	ORUFI01G06710	N	0.000
ORUFI01G22920	Oryza rufipogon	ORUFI01G22920	N	0.000
OS01G0195801	Oryza sativa	OS01G0195801	N	0.000
OMERI01G06310	Oryza meridionalis	OMERI01G06310	N	0.000
OS01G0575200	Oryza sativa	OS01G0575200	N	0.000
Sb03g002910	Sorghum bicolor	Sb03g002910	N	0.000
Sb03g025860	Sorghum bicolor	Sb03g025860	N	0.000
Si001328m.g	Setaria italica	Si001328m.g	N	0.000
Si001494m.g	Setaria italica	Si001494m.g	N	0.000
TRAES3BF047700010CFD_g	Triticum aestivum	TRAES3BF047700010CFD_g	N	0.000
Pavir.Ea00369	Panicum virgatum	Pavir.Ea00369	N	0.000
Pavir.Ea01566	Panicum virgatum	Pavir.Ea01566	N	0.000
Pavir.Eb01823	Panicum virgatum	Pavir.Eb01823	N	0.000
MLOC_70258	Hordeum vulgare	MLOC_70258	N	0.000
BGIOSGA002943	Oryza indica	BGIOSGA002943	N	0.000
BGIOSGA003814	Oryza indica	BGIOSGA003814	N	0.000
BRADI2G41670	Brachypodium distachyon	BRADI2G41670	N	0.000
GRMZM2G333582	Zea mays	GRMZM2G333582	N	0.000
GRMZM2G397755	Zea mays	GRMZM2G397755	N	0.000
GRMZM2G463133	Zea mays	GRMZM2G463133	N	0.000
GRMZM5G849600	Zea mays	GRMZM5G849600	N	0.000
LPERR01G05820	Leersia perrieri	LPERR01G05820	N	0.000
LPERR01G17450	Leersia perrieri	LPERR01G17450	N	0.000
BGIOSGA002940	Oryza indica	BGIOSGA002940	N	0.000
OB01G16120	Oryza brachyantha	OB01G16120	N	0.000
OB01G30040	Oryza brachyantha	OB01G30040	N	0.000
OBART01G06120	Oryza barthii	OBART01G06120	N	0.000
OBART01G06170	Oryza barthii	OBART01G06170	N	0.000
OBART01G20310	Oryza barthii	OBART01G20310	N	0.000
OGLUM01G06690	Oryza glumaepatula	OGLUM01G06690	N	0.000
OGLUM01G06730	Oryza glumaepatula	OGLUM01G06730	N	0.000
OGLUM01G23890	Oryza glumaepatula	OGLUM01G23890	N	0.000
OLONG_006433	Oryza longistaminata	OLONG_006433	N	0.000

Fosb (Rattus norvegicus) bZIP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

292 Related TFs

Fosb **(Rattus norvegicus)
bZIP**