CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G03790_001
(
Musa acuminata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GSMUA_Achr4G03790_001
T063272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.806
0.492
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.806
0.492
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.797
0.524
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.797
0.524
OS02G0266800
M10046_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.789
0.540
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.783
0.540
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P03790_001
bZIP
29
91
MDQKKRKRMISNRESARRSRMRKQKHLDDLTAQVNQLRKENSQILSSLTLTTQQCFAVEADNS
Links
Other
bZIP
family TFs
Other
Musa acuminata
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSORLG00000004512
Oryzias latipes
ENSORLG00000004512
N
Gfo_R002231
Geospiza fortis
Gfo_R002231
N
ENSXMAG00000016412
Xiphophorus maculatus
ENSXMAG00000016412
N
ENSXMAG00000001328
Xiphophorus maculatus
ENSXMAG00000001328
N
aebp2
Takifugu rubripes
ENSTRUG00000010318
N
aebp2
Tetraodon nigroviridis
ENSTNIG00000007244
N
ENSPFOG00000008425
Poecilia formosa
ENSPFOG00000008425
N
ENSPFOG00000005718
Poecilia formosa
ENSPFOG00000005718
N
aebp2
Oryzias latipes
ENSORLG00000012453
N
ENSAMXG00000000561
Astyanax mexicanus
ENSAMXG00000000561
N
ENSONIG00000008507
Oreochromis niloticus
ENSONIG00000008507
N
ENSLOCG00000015421
Lepisosteus oculatus
ENSLOCG00000015421
N
ENSGMOG00000005290
Gadus morhua
ENSGMOG00000005290
N
aebp2
Gasterosteus aculeatus
ENSGACG00000019249
N
ENSGACG00000010024
Gasterosteus aculeatus
ENSGACG00000010024
N
ENSFALG00000001055
Ficedula albicollis
ENSFALG00000001055
N
aebp2
Danio rerio
ENSDARG00000006038
N