CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI01G41310
(
Oryza rufipogon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ORUFI01G41310
T066056_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.811
0.578
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.828
0.619
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.828
0.619
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.811
0.578
ABF4
M09911_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.811
0.578
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.808
0.587
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.808
0.587
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.808
0.587
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.808
0.587
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.808
0.587
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.807
0.492
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.792
0.571
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN
NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.800
0.562
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.795
0.578
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.795
0.578
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.795
0.578
ABF1
M09906_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.795
0.578
ABF1
M09907_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.795
0.578
ABF1
M09908_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.795
0.578
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.786
0.578
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.786
0.578
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI01G41310.1
bZIP
300
372
KTVERRQRRMIKNRESAARSRARKQAYTVELEAELNYLKQENARLKEAEKTVLLTKKQMLVEKMMEQSKEKMN
ORUFI01G41310.2
bZIP
300
362
KTVERRQRRMIKNRESAARSRARKQAYTVELEAELNYLKQENARLKEAELVEKMMEQSKEKMN
Links
Other
bZIP
family TFs
Other
Oryza rufipogon
TFs
449 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI003098
Anopheles epiroticus
AEPI003098
N
0.000
SINV23345
Solenopsis invicta
SINV23345
N
0.000
Cflo_01443--XP_624772.1_APIME
Camponotus floridanus
Cflo_01443--XP_624772.1_APIME
N
0.000
Cflo_16445--XP_624772.1_APIME
Camponotus floridanus
Cflo_16445--XP_624772.1_APIME
N
0.000
Hsal_02965--XP_624772.1_APIME
Harpegnathos saltator
Hsal_02965--XP_624772.1_APIME
N
0.000
Pvit_06515
Pogona vitticeps
Pvit_06515
N
0.000
Tal_R002680
Tyto alba
Tal_R002680
N
0.000
Tal_R005095
Tyto alba
Tal_R005095
N
0.000
estExt_fgenesh2_pg.C_20012
Branchiostoma floridae
estExt_fgenesh2_pg.C_20012
N
0.000
LDEC008394
Leptinotarsa decemlineata
LDEC008394
N
0.000
PHUM483400
Pediculus humanus
PHUM483400
N
0.000
AMEC001813
Anopheles melas
AMEC001813
N
0.000
LLOJ001749
Lutzomyia longipalpis
LLOJ001749
N
0.000
ANCCEY_14935
Ancylostoma ceylanicum
ANCCEY_14935
N
0.000
D917_05405
Trichinella nativa
D917_05405
N
0.000
D917_09827
Trichinella nativa
D917_09827
N
0.000
nRc.2.0.1.g28453
Romanomermis culicivorax
nRc.2.0.1.g28453
N
0.000
OESDEN_21938
Oesophagostomum dentatum
OESDEN_21938
N
0.000
SBAD_0001243701
Soboliphyme baturini
SBAD_0001243701
N
0.000
KLF8
Sus scrofa
ENSSSCG00000012352
N
0.000
ACEP19659
Atta cephalotes
ACEP19659
N
0.000
ENSAMEG00000007945
Ailuropoda melanoleuca
ENSAMEG00000007945
N
0.000
KLF8
Bos taurus
ENSBTAG00000005852
N
0.000
klf4
Danio rerio
ENSDARG00000079922
N
0.000
ENSMGAG00000006899
Meleagris gallopavo
ENSMGAG00000006899
N
0.000
KLF12
Oryctolagus cuniculus
ENSOCUG00000004244
N
0.000
KLF8
Otolemur garnettii
ENSOGAG00000000346
N
0.000
KLF5
Ochotona princeps
ENSOPRG00000007620
N
0.000
KLF3
Procavia capensis
ENSPCAG00000015573
N
0.000
ACEP15823
Atta cephalotes
ACEP15823
N
0.000
ENSSSCG00000012353
Sus scrofa
ENSSSCG00000012353
N
0.000
KLF3
Tupaia belangeri
ENSTBEG00000015639
N
0.000
ENSTBEG00000016090
Tupaia belangeri
ENSTBEG00000016090
N
0.000
ENSTTRG00000010639
Tursiops truncatus
ENSTTRG00000010639
N
0.000
KLF8
Vicugna pacos
ENSVPAG00000009577
N
0.000
ENSXMAG00000007445
Xiphophorus maculatus
ENSXMAG00000007445
N
0.000
MESCA001789
Megaselia scalaris
MESCA001789
N
0.000
NV16825
Nasonia vitripennis
NV16825
N
0.000