POPTR_0009s16590 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0009s16590 T066988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.794 0.882
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.794 0.882
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.794 0.882
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.794 0.882
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.794 0.863
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.794 0.863
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.794 0.863
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.794 0.863
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.794 0.863
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.794 0.863
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.794 0.863
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.794 0.863
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.794 0.863
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.794 0.843
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s16590.1 bZIP 178 230

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA6 Arabidopsis thaliana AT3G12250 D 0.794
TGA2 Arabidopsis thaliana AT5G06950 D 0.794
TGA5 Arabidopsis thaliana AT5G06960 D 0.794
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.794
PK09021.1 Cannabis sativa PK09021.1 D 0.794
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I 0.807
BGIOSGA000624 Oryza indica BGIOSGA000624 I 0.785
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.794
Bo1g139470 Brassica oleracea Bo1g139470 I 0.794
Bo2g007460 Brassica oleracea Bo2g007460 I 0.794
Bo3g064830 Brassica oleracea Bo3g064830 I 0.794
Bo5g133550 Brassica oleracea Bo5g133550 I 0.794
Bo9g175710 Brassica oleracea Bo9g175710 I 0.794
Bra001443 Brassica rapa Bra001443 I 0.794
Bra009241 Brassica rapa Bra009241 I 0.794
Bra028713 Brassica rapa Bra028713 I 0.794
Bra034767 Brassica rapa Bra034767 I 0.794
Bra038705 Brassica rapa Bra038705 I 0.794
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.794
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.794
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.794
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.794
GLYMA11G19026 Glycine max GLYMA11G19026 I 0.807
GLYMA12G09430 Glycine max GLYMA12G09430 I 0.807
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.794
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.794
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.794
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.794
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.790
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.794
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.790
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.794
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.794
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I 0.803
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.788
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.794
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.794
GSMUA_Achr8G21670_001 Musa acuminata GSMUA_Achr8G21670_001 I 0.787
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.794
MLOC_14596 Hordeum vulgare MLOC_14596 I 0.783
MTR_2g086420 Medicago truncatula MTR_2g086420 I 0.807
MTR_4g053250 Medicago truncatula MTR_4g053250 I 0.793
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.794
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.794
OB01G21470 Oryza brachyantha OB01G21470 I 0.794
OB01G43330 Oryza brachyantha OB01G43330 I 0.790
OBART01G11380 Oryza barthii OBART01G11380 I 0.794
OBART01G34430 Oryza barthii OBART01G34430 I 0.785
OGLUM01G20660 Oryza glumaepatula OGLUM01G20660 I 0.785
OLONG_020675 Oryza longistaminata OLONG_020675 I 0.785
OMERI01G31730 Oryza meridionalis OMERI01G31730 I 0.785
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.794
ONIVA01G39320 Oryza nivara ONIVA01G39320 I 0.785
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.794
OPUNC01G33450 Oryza punctata OPUNC01G33450 I 0.785
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.794
ORUFI01G37800 Oryza rufipogon ORUFI01G37800 I 0.785
TGA2.3 Oryza sativa OS01G0279900 I 0.794
OS01G0808100 Oryza sativa OS01G0808100 I 0.785
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.794
PGSC0003DMG402023696 Solanum tuberosum PGSC0003DMG402023696 I 0.794
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.794
POPTR_0004s21360 Populus trichocarpa POPTR_0004s21360 I 0.796
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.794
PAN Populus trichocarpa POPTR_0008s11710 I 0.794
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.794
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.792
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I 0.807
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.794
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.794
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.790
Sb04g006500 Sorghum bicolor Sb04g006500 I 0.804
Si001292m.g Setaria italica Si001292m.g I 0.790
Si002195m.g Setaria italica Si002195m.g I 0.794
Solyc10g080770.1 Solanum lycopersicum Solyc10g080770.1 I 0.794
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.794
TCM_011845 Theobroma cacao TCM_011845 I 0.794
TCM_023491 Theobroma cacao TCM_023491 I 0.794
TCM_023492 Theobroma cacao TCM_023492 I 0.794
TCM_024862 Theobroma cacao TCM_024862 I 0.791
TCM_041421 Theobroma cacao TCM_041421 I 0.807
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.794
Traes_7DS_E5A18AAA4 Triticum aestivum Traes_7DS_E5A18AAA4 I 0.783
TRIUR3_33475 Triticum urartu TRIUR3_33475 I 0.783
PAN Vitis vinifera VIT_01s0011g03230 I 0.794
TGA9 Vitis vinifera VIT_06s0080g00360 I 0.807
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.794
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.791
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.794
Ca_07057 Cicer arietinum Ca_07057 I 0.807
Ca_07170 Cicer arietinum Ca_07170 I 0.794
Ca_10901 Cicer arietinum Ca_10901 I 0.794
Ca_17971 Cicer arietinum Ca_17971 I 0.794
Cla002918 Citrullus lanatus Cla002918 I 0.794
Cla008794 Citrullus lanatus Cla008794 I 0.807
Cla010092 Citrullus lanatus Cla010092 I 0.794
Cla017796 Citrullus lanatus Cla017796 I 0.791
Cla022393 Citrullus lanatus Cla022393 I 0.794
Pm001317 Prunus mume Pm001317 I 0.807
Pm016643 Prunus mume Pm016643 I 0.794
Pm025995 Prunus mume Pm025995 I 0.792
Pm028917 Prunus mume Pm028917 I 0.794
29216.m000249 Ricinus communis 29216.m000249 I 0.791
30055.m001550 Ricinus communis 30055.m001550 I 0.809
30131.m007163 Ricinus communis 30131.m007163 I 0.794
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I 0.809
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.794
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.794
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.794
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.794
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.794
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.794
Cucsa.199800 Cucumis sativus Cucsa.199800 I 0.790
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.792
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.794
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.794
mgf001395m Mimulus guttatus mgf001395m I 0.807
mgf005858m Mimulus guttatus mgf005858m I 0.794
mgf025345m Mimulus guttatus mgf025345m I 0.792
Aquca_004_00127 Aquilegia coerulea Aquca_004_00127 I 0.793
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.794
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.792
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.794
Aquca_072_00138 Aquilegia coerulea Aquca_072_00138 I 0.788
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.794
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.794
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.794
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.794
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.794
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.794
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.794
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.794
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.794
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.794
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.791
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.794
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I 0.787
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.794
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I 0.807
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.794
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.794
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I 0.807
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.794
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.794
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.791
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.791
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I 0.807
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.794
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.792
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.791
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I 0.807
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.791
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.794
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.794
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.794
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.794
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.794
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.794
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.794
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.794
Lus10034296.g Linum usitatissimum Lus10034296.g I 0.809
Lus10041475.g Linum usitatissimum Lus10041475.g I 0.809
MDP0000262210 Malus domestica MDP0000262210 I 0.794
MDP0000300532 Malus domestica MDP0000300532 I 0.794
MDP0000307943 Malus domestica MDP0000307943 I 0.792
MDP0000320322 Malus domestica MDP0000320322 I 0.792
MDP0000320524 Malus domestica MDP0000320524 I 0.794
MDP0000536881 Malus domestica MDP0000536881 I 0.794
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.794
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.791
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.794
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.794
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.790
SapurV1A.0018s0400 Salix purpurea SapurV1A.0018s0400 I 0.786
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.794
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I 0.796
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.794
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.794
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I 0.809
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.792
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.794
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.794
PK07387.1 Cannabis sativa PK07387.1 I 0.807
PK13754.1 Cannabis sativa PK13754.1 I 0.794
PK21698.1 Cannabis sativa PK21698.1 I 0.791
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.794
PDK_20s1462851g003 Phoenix dactylifera PDK_20s1462851g003 I 0.787
F775_05299 Aegilops tauschii F775_05299 N 0.786
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N 0.787
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N 0.783
MLOC_17690 Hordeum vulgare MLOC_17690 N 0.786
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N 0.786
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N 0.786
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N 0.786
Ca_16486 Cicer arietinum Ca_16486 N 0.790
cassava13449.valid.m1 Manihot esculenta cassava13449.valid.m1 N 0.797
Cucsa.365420 Cucumis sativus Cucsa.365420 N 0.792
Cucsa.385130 Cucumis sativus Cucsa.385130 N 0.788
mgf016030m Mimulus guttatus mgf016030m N 0.792
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N 0.790