CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa007578mg
(
Prunus persica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
PRUPE_ppa007578mg
T067077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA1A
M02662_2.00
Nicotiana sp.
TGACGTD
HACGTCA
SELEX
Mathelier et al.(2014)
MA0129.1
0.784
0.820
TGA1A_TOBAC
M10081_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2_01
0.784
0.820
TGA1A_TOBAC
M10082_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2
0.784
0.820
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ06605
bZIP
74
123
KPTDKVQRRLAQNREAARKSRMRKKAYVQQLETSRLKLIQLEQELDRARQ
Links
Other
bZIP
family TFs
Other
Prunus persica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1358061g001
Phoenix dactylifera
PDK_20s1358061g001
N