CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_3AL_C5E13251D
(
Triticum aestivum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Traes_3AL_C5E13251D
T068654_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.783
0.816
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.783
0.816
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.783
0.816
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_3AL_C5E13251D.1
bZIP
27
75
DSKTERRLAQNREAAKKSRLRKKAYVQNLETSRVRLQQMEQELQRARSQ
Links
Other
bZIP
family TFs
Other
Triticum aestivum
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGA9
Arabidopsis thaliana
AT1G08320
D
0.783
Cagra.4395s0022
Capsella grandiflora
Cagra.4395s0022
I
0.783
OMERI01G34960
Oryza meridionalis
OMERI01G34960
I
0.797
ONIVA04G25750
Oryza nivara
ONIVA04G25750
I
0.797
AMTR_s00010p00030830
Amborella trichopoda
AMTR_s00010p00030830
I
0.798
ORGLA01G0318100
Oryza glaberrima
ORGLA01G0318100
I
0.797
ORUFI01G41330
Oryza rufipogon
ORUFI01G41330
I
0.797
LG2
Oryza sativa
OS01G0859500
I
0.797
Solyc06g074320.2
Solanum lycopersicum
Solyc06g074320.2
I
0.783
TRAES3BF099600030CFD_g
Triticum aestivum
TRAES3BF099600030CFD_g
I
0.807
Traes_3DL_4A4D552B2
Triticum aestivum
Traes_3DL_4A4D552B2
I
0.807
Bostr.25219s0112
Boechera stricta
Bostr.25219s0112
I
0.783
OPUNC01G36830
Oryza punctata
OPUNC01G36830
I
0.797
Carubv10011576m.g
Capsella rubella
Carubv10011576m.g
I
0.783
Ciclev10028428m.g
Citrus clementina
Ciclev10028428m.g
I
0.783
Eucgr.B03855
Eucalyptus grandis
Eucgr.B03855
I
0.787
Lus10004876.g
Linum usitatissimum
Lus10004876.g
I
0.785
Lus10020610.g
Linum usitatissimum
Lus10020610.g
I
0.785
orange1.1g036039m.g
Citrus sinensis
orange1.1g036039m.g
I
0.783
SapurV1A.0018s0400
Salix purpurea
SapurV1A.0018s0400
I
0.786
Thhalv10007490m.g
Eutrema salsugineum
Thhalv10007490m.g
I
0.783
OGLUM01G42170
Oryza glumaepatula
OGLUM01G42170
I
0.797
AMTR_s00095p00059370
Amborella trichopoda
AMTR_s00095p00059370
I
0.798
BGIOSGA000451
Oryza indica
BGIOSGA000451
I
0.797
Bo5g008940
Brassica oleracea
Bo5g008940
I
0.783
Bo8g112540
Brassica oleracea
Bo8g112540
I
0.783
Bra018634
Brassica rapa
Bra018634
I
0.783
Bra031622
Brassica rapa
Bra031622
I
0.783
BRADI2G55567
Brachypodium distachyon
BRADI2G55567
I
0.807
fgenesh1_pm.C_scaffold_1000665
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1000665
I
0.783
LPERR01G32640
Leersia perrieri
LPERR01G32640
I
0.797
MLOC_65998
Hordeum vulgare
MLOC_65998
I
0.807
OB01G46780
Oryza brachyantha
OB01G46780
I
0.797
OBART01G38000
Oryza barthii
OBART01G38000
I
0.797
OLONG_014543
Oryza longistaminata
OLONG_014543
I
0.797
Traes_1BL_B03720C3B
Triticum aestivum
Traes_1BL_B03720C3B
N
0.796
Traes_1DL_AFDF3B024
Triticum aestivum
Traes_1DL_AFDF3B024
N
0.796
GSMUA_Achr11G26170_001
Musa acuminata
GSMUA_Achr11G26170_001
N
0.785
GSMUA_Achr10G10300_001
Musa acuminata
GSMUA_Achr10G10300_001
N
0.788
Ca_07292
Cicer arietinum
Ca_07292
N
0.785
GRMZM2G060216
Zea mays
GRMZM2G060216
N
0.797
Si000955m.g
Setaria italica
Si000955m.g
N
0.797
BRADI2G23890
Brachypodium distachyon
BRADI2G23890
N
0.796
Sb03g040530
Sorghum bicolor
Sb03g040530
N
0.797
MLOC_79223
Hordeum vulgare
MLOC_79223
N
0.796
Pavir.Ea03760
Panicum virgatum
Pavir.Ea03760
N
0.786