Ciclev10028428m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10028428m.g T071650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.791 0.961
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.791 0.961
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.791 0.961
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.786 0.882
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.786 0.882
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.786 0.882
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.786 0.882
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.786 0.863
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.786 0.863
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.786 0.863
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.786 0.863
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.786 0.863
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.786 0.863
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.786 0.863
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.786 0.863
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.786 0.863
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.786 0.843
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10028428m bZIP 143 193

Links

Other bZIP family TFs
Other Citrus clementina TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Rel Mus musculus ENSMUSG00000020275 D 0.000
REL Homo sapiens ENSG00000162924 D 0.000
REL Vicugna pacos ENSVPAG00000000493 I 0.000
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.000
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I 0.000
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.000
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.000
REL Pan troglodytes ENSPTRG00000011949 I 0.000
REL Pteropus vampyrus ENSPVAG00000000364 I 0.000
Rel Rattus norvegicus ENSRNOG00000054437 I 0.000
REL Sorex araneus ENSSARG00000011809 I 0.000
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I 0.000
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.000
REL Taeniopygia guttata ENSTGUG00000006743 I 0.000
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I 0.000
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.000
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I 0.000
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I 0.000
Aan_R006375 Calypte anna Aan_R006375 I 0.000
Afo_R011359 Aptenodytes forsteri Afo_R011359 I 0.000
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.000
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.000
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.000
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.000
Gfo_R008165 Geospiza fortis Gfo_R008165 I 0.000
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.000
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.000
rel.S Xenopus laevis XB-GENE-17342653 I 0.000
rel Xenopus tropicalis XB-GENE-993262 I 0.000
rel.L Xenopus laevis XB-GENE-993266 I 0.000
REL Loxodonta africana ENSLAFG00000013507 I 0.000
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I 0.000
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I 0.000
REL Bos taurus ENSBTAG00000015386 I 0.000
REL Canis familiaris ENSCAFG00000002981 I 0.000
REL Callithrix jacchus ENSCJAG00000008975 I 0.000
REL Cavia porcellus ENSCPOG00000011659 I 0.000
REL Equus caballus ENSECAG00000003277 I 0.000
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.000
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.000
REL Felis catus ENSFCAG00000008018 I 0.000
REL Gallus gallus ENSGALG00000007845 I 0.000
REL Gorilla gorilla ENSGGOG00000024826 I 0.000
ENSGMOG00000018800 Gadus morhua ENSGMOG00000018800 I 0.000
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.000
rel Oryzias latipes ENSORLG00000001586 I 0.000
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.000
REL Meleagris gallopavo ENSMGAG00000001721 I 0.000
REL Myotis lucifugus ENSMLUG00000007454 I 0.000
REL Macaca mulatta ENSMMUG00000010834 I 0.000
REL Monodelphis domestica ENSMODG00000002172 I 0.000
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.000
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.000
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.000
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.000
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.000
REL Otolemur garnettii ENSOGAG00000013722 I 0.000
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.000
ENSTNIG00000017107 Tetraodon nigroviridis ENSTNIG00000017107 N 0.000