CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g025739m.g
(
Citrus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
orange1.1g025739m.g
T072265_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g025678m
bZIP
189
242
EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEAST
orange1.1g025739m
bZIP
189
242
EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEAST
orange1.1g025871m
bZIP
189
245
EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKVRISSMF
orange1.1g026303m
bZIP
189
240
EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKTT
orange1.1g027569m
bZIP
189
219
EKSIERRLRRKIKNRESAARSRARKQVAYNC
Links
Other
bZIP
family TFs
Other
Citrus sinensis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BIM2
Arabidopsis thaliana
AT1G69010
D
UNE10
Arabidopsis thaliana
AT4G00050
D
SPT
Arabidopsis thaliana
AT4G36930
D
BIM1
Arabidopsis thaliana
AT5G08130
D
fgenesh1_pg.scaffold_37000071
Physcomitrella patens
fgenesh1_pg.scaffold_37000071
D
AMTR_s00006p00250310
Amborella trichopoda
AMTR_s00006p00250310
I
AMTR_s00046p00066610
Amborella trichopoda
AMTR_s00046p00066610
I
AMTR_s00129p00124210
Amborella trichopoda
AMTR_s00129p00124210
I
ALC
Arabidopsis thaliana
AT5G67110
I
BGIOSGA021743
Oryza indica
BGIOSGA021743
I
BGIOSGA022375
Oryza indica
BGIOSGA022375
I
BGIOSGA028888
Oryza indica
BGIOSGA028888
I
Bo1g004970
Brassica oleracea
Bo1g004970
I
Bo2g062560
Brassica oleracea
Bo2g062560
I
Bo2g161110
Brassica oleracea
Bo2g161110
I
Bo3g004690
Brassica oleracea
Bo3g004690
I
Bo3g042120
Brassica oleracea
Bo3g042120
I
Bo3g054850
Brassica oleracea
Bo3g054850
I
Bo3g153630
Brassica oleracea
Bo3g153630
I
Bo5g020460
Brassica oleracea
Bo5g020460
I
Bo6g108530
Brassica oleracea
Bo6g108530
I
Bo9g174770
Brassica oleracea
Bo9g174770
I
Bra000560
Brassica rapa
Bra000560
I
Bra004355
Brassica rapa
Bra004355
I
Bra005969
Brassica rapa
Bra005969
I
Bra009322
Brassica rapa
Bra009322
I
Bra010591
Brassica rapa
Bra010591
I
Bra011740
Brassica rapa
Bra011740
I
Bra012133
Brassica rapa
Bra012133
I
Bra029354
Brassica rapa
Bra029354
I
Bra037312
Brassica rapa
Bra037312
I
Bra038332
Brassica rapa
Bra038332
I
BRADI1G48400
Brachypodium distachyon
BRADI1G48400
I
BRADI3G38970
Brachypodium distachyon
BRADI3G38970
I
BRADI3G46200
Brachypodium distachyon
BRADI3G46200
I
BRADI3G56340
Brachypodium distachyon
BRADI3G56340
I
SPT
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7000292
I
BIM2
Arabidopsis lyrata
fgenesh2_kg.2__1159__AT1G69010.1
I
ALC
Arabidopsis lyrata
fgenesh2_kg.8__2705__AT5G67110.1
I
GLYMA01G09010
Glycine max
GLYMA01G09010
I
GLYMA01G15930
Glycine max
GLYMA01G15930
I
GLYMA01G32890
Glycine max
GLYMA01G32890
I
GLYMA01G39451
Glycine max
GLYMA01G39451
I
GLYMA02G13670
Glycine max
GLYMA02G13670
I
GLYMA03G04000
Glycine max
GLYMA03G04000
I
GLYMA05G07490
Glycine max
GLYMA05G07490
I
GLYMA08G28010
Glycine max
GLYMA08G28010
I
GLYMA11G17120
Glycine max
GLYMA11G17120
I
GLYMA14G09231
Glycine max
GLYMA14G09231
I
GLYMA17G08980
Glycine max
GLYMA17G08980
I
GLYMA17G35951
Glycine max
GLYMA17G35951
I
GLYMA18G51080
Glycine max
GLYMA18G51080
I
GRMZM2G017349
Zea mays
GRMZM2G017349
I
GRMZM2G024530
Zea mays
GRMZM2G024530
I
GRMZM2G116785
Zea mays
GRMZM2G116785
I
GRMZM2G172795
Zea mays
GRMZM2G172795
I
GSMUA_Achr10G09040_001
Musa acuminata
GSMUA_Achr10G09040_001
I
GSMUA_Achr2G05450_001
Musa acuminata
GSMUA_Achr2G05450_001
I
GSMUA_Achr4G19530_001
Musa acuminata
GSMUA_Achr4G19530_001
I
GSMUA_Achr7G20810_001
Musa acuminata
GSMUA_Achr7G20810_001
I
GSMUA_Achr8G15670_001
Musa acuminata
GSMUA_Achr8G15670_001
I
GSMUA_Achr9G19110_001
Musa acuminata
GSMUA_Achr9G19110_001
I
GSMUA_Achr9G28050_001
Musa acuminata
GSMUA_Achr9G28050_001
I
LPERR04G17400
Leersia perrieri
LPERR04G17400
I
LPERR06G03910
Leersia perrieri
LPERR06G03910
I
LPERR06G05570
Leersia perrieri
LPERR06G05570
I
MLOC_62335
Hordeum vulgare
MLOC_62335
I
MLOC_65463
Hordeum vulgare
MLOC_65463
I
MTR_1g019240
Medicago truncatula
MTR_1g019240
I
MTR_4g110040
Medicago truncatula
MTR_4g110040
I
MTR_5g017040
Medicago truncatula
MTR_5g017040
I
MTR_5g048350
Medicago truncatula
MTR_5g048350
I
MTR_7g017320
Medicago truncatula
MTR_7g017320
I
OB08G25940
Oryza brachyantha
OB08G25940
I
OBART06G04330
Oryza barthii
OBART06G04330
I
OBART06G06000
Oryza barthii
OBART06G06000
I
OGLUM06G04430
Oryza glumaepatula
OGLUM06G04430
I
OGLUM06G06280
Oryza glumaepatula
OGLUM06G06280
I
OGLUM08G19830
Oryza glumaepatula
OGLUM08G19830
I
OLONG_003583
Oryza longistaminata
OLONG_003583
I
OLONG_013313
Oryza longistaminata
OLONG_013313
I
OMERI06G05430
Oryza meridionalis
OMERI06G05430
I
OMERI06G07190
Oryza meridionalis
OMERI06G07190
I
ONIVA06G05510
Oryza nivara
ONIVA06G05510
I
ONIVA06G06960
Oryza nivara
ONIVA06G06960
I
ONIVA08G20800
Oryza nivara
ONIVA08G20800
I
OPUNC06G05770
Oryza punctata
OPUNC06G05770
I
OPUNC08G16820
Oryza punctata
OPUNC08G16820
I
ORGLA06G0039900
Oryza glaberrima
ORGLA06G0039900
I
ORGLA08G0164200
Oryza glaberrima
ORGLA08G0164200
I
ORUFI06G04330
Oryza rufipogon
ORUFI06G04330
I
ORUFI06G06220
Oryza rufipogon
ORUFI06G06220
I
ORUFI08G21030
Oryza rufipogon
ORUFI08G21030
I
OS06G0193400
Oryza sativa
OS06G0193400
I
OS08G0490000
Oryza sativa
OS08G0490000
I
PGSC0003DMG400001919
Solanum tuberosum
PGSC0003DMG400001919
I
PGSC0003DMG400004011
Solanum tuberosum
PGSC0003DMG400004011
I
PGSC0003DMG400019654
Solanum tuberosum
PGSC0003DMG400019654
I
PGSC0003DMG400025976
Solanum tuberosum
PGSC0003DMG400025976
I
PGSC0003DMG401007955
Solanum tuberosum
PGSC0003DMG401007955
I
POPTR_0002s14430
Populus trichocarpa
POPTR_0002s14430
I
POPTR_0004s11180
Populus trichocarpa
POPTR_0004s11180
I
POPTR_0005s18280
Populus trichocarpa
POPTR_0005s18280
I
POPTR_0006s13790
Populus trichocarpa
POPTR_0006s13790
I
POPTR_0008s11120
Populus trichocarpa
POPTR_0008s11120
I
POPTR_0010s14740
Populus trichocarpa
POPTR_0010s14740
I
POPTR_0012s06650
Populus trichocarpa
POPTR_0012s06650
I
POPTR_0014s02590
Populus trichocarpa
POPTR_0014s02590
I
POPTR_0015s03550
Populus trichocarpa
POPTR_0015s03550
I
POPTR_0017s13610
Populus trichocarpa
POPTR_0017s13610
I
PRUPE_ppa003436mg
Prunus persica
PRUPE_ppa003436mg
I
PRUPE_ppa005629mg
Prunus persica
PRUPE_ppa005629mg
I
PRUPE_ppa008387mg
Prunus persica
PRUPE_ppa008387mg
I
PRUPE_ppa008856mg
Prunus persica
PRUPE_ppa008856mg
I
PRUPE_ppa014897mg
Prunus persica
PRUPE_ppa014897mg
I
PRUPE_ppa017709mg
Prunus persica
PRUPE_ppa017709mg
I
PRUPE_ppa021918mg
Prunus persica
PRUPE_ppa021918mg
I
Sb06g025040
Sorghum bicolor
Sb06g025040
I
Sb06g025060
Sorghum bicolor
Sb06g025060
I
Sb07g028860
Sorghum bicolor
Sb07g028860
I
Sb10g004500
Sorghum bicolor
Sb10g004500
I
Sb10g006250
Sorghum bicolor
Sb10g006250
I
BIM1
Arabidopsis lyrata
scaffold_600819.1
I
UNE10
Arabidopsis lyrata
scaffold_604304.1
I
SELMODRAFT_425336
Selaginella moellendorffii
SELMODRAFT_425336
I
SELMODRAFT_451475
Selaginella moellendorffii
SELMODRAFT_451475
I
SELMODRAFT_451477
Selaginella moellendorffii
SELMODRAFT_451477
I
Si000845m.g
Setaria italica
Si000845m.g
I
Si006332m.g
Setaria italica
Si006332m.g
I
Si012401m.g
Setaria italica
Si012401m.g
I
Si013622m.g
Setaria italica
Si013622m.g
I
Solyc01g090790.2
Solanum lycopersicum
Solyc01g090790.2
I
Solyc02g093280.2
Solanum lycopersicum
Solyc02g093280.2
I
Solyc03g114720.2
Solanum lycopersicum
Solyc03g114720.2
I
Solyc04g005280.2
Solanum lycopersicum
Solyc04g005280.2
I
Solyc04g078690.2
Solanum lycopersicum
Solyc04g078690.2
I
Solyc05g011810.2
Solanum lycopersicum
Solyc05g011810.2
I
Solyc06g069370.2
Solanum lycopersicum
Solyc06g069370.2
I
TCM_000649
Theobroma cacao
TCM_000649
I
TCM_004959
Theobroma cacao
TCM_004959
I
TCM_005607
Theobroma cacao
TCM_005607
I
TCM_011433
Theobroma cacao
TCM_011433
I
TCM_014392
Theobroma cacao
TCM_014392
I
TCM_019015
Theobroma cacao
TCM_019015
I
TCM_033802
Theobroma cacao
TCM_033802
I
TCM_037455
Theobroma cacao
TCM_037455
I
Traes_6BL_DA93728B3
Triticum aestivum
Traes_6BL_DA93728B3
I
Traes_6DL_D38F3257B
Triticum aestivum
Traes_6DL_D38F3257B
I
BIM2
Vitis vinifera
VIT_01s0010g00540
I
VIT_07s0031g00450
Vitis vinifera
VIT_07s0031g00450
I
VIT_11s0016g00380
Vitis vinifera
VIT_11s0016g00380
I
BIM3
Vitis vinifera
VIT_14s0083g00930
I
UNE10
Vitis vinifera
VIT_15s0021g02690
I
BIM1
Vitis vinifera
VIT_17s0000g04790
I
VIT_18s0001g10270
Vitis vinifera
VIT_18s0001g10270
I
Ca_02162
Cicer arietinum
Ca_02162
I
Ca_19269
Cicer arietinum
Ca_19269
I
Ca_22043
Cicer arietinum
Ca_22043
I
Ca_22883
Cicer arietinum
Ca_22883
I
Cla000718
Citrullus lanatus
Cla000718
I
Cla018818
Citrullus lanatus
Cla018818
I
Cla022382
Citrullus lanatus
Cla022382
I
Pm026389
Prunus mume
Pm026389
I
Pm027004
Prunus mume
Pm027004
I
29739.m003684
Ricinus communis
29739.m003684
I
29790.m000843
Ricinus communis
29790.m000843
I
30115.m001235
Ricinus communis
30115.m001235
I
30138.m003899
Ricinus communis
30138.m003899
I
30138.m003913
Ricinus communis
30138.m003913
I
30170.m013852
Ricinus communis
30170.m013852
I
30174.m008814
Ricinus communis
30174.m008814
I
cassava10497.m1
Manihot esculenta
cassava10497.m1
I
cassava13956.valid.m1
Manihot esculenta
cassava13956.valid.m1
I
cassava14.valid.m1
Manihot esculenta
cassava14.valid.m1
I
cassava15.valid.m1
Manihot esculenta
cassava15.valid.m1
I
cassava19894.m1
Manihot esculenta
cassava19894.m1
I
cassava29314.valid.m1
Manihot esculenta
cassava29314.valid.m1
I
cassava29318.valid.m1
Manihot esculenta
cassava29318.valid.m1
I
cassava35035.m1
Manihot esculenta
cassava35035.m1
I
cassava43370.valid.m1
Manihot esculenta
cassava43370.valid.m1
I
cassava43379.valid.m1
Manihot esculenta
cassava43379.valid.m1
I
cassava44831.m1
Manihot esculenta
cassava44831.m1
I
cassava47359.m1
Manihot esculenta
cassava47359.m1
I
cassava9239.m1
Manihot esculenta
cassava9239.m1
I
Cucsa.102530
Cucumis sativus
Cucsa.102530
I
Cucsa.113490
Cucumis sativus
Cucsa.113490
I
Cucsa.174600
Cucumis sativus
Cucsa.174600
I
Cucsa.198520
Cucumis sativus
Cucsa.198520
I
Cucsa.328060
Cucumis sativus
Cucsa.328060
I
estExt_fgenesh1_pg.C_2110039
Physcomitrella patens
estExt_fgenesh1_pg.C_2110039
I
gw1.90.123.1
Physcomitrella patens
gw1.90.123.1
I
mg025182m
Mimulus guttatus
mg025182m
I
mgf000445m
Mimulus guttatus
mgf000445m
I
mgf001137m
Mimulus guttatus
mgf001137m
I
mgf005431m
Mimulus guttatus
mgf005431m
I
mgf005849m
Mimulus guttatus
mgf005849m
I
mgf011829m
Mimulus guttatus
mgf011829m
I
mgf013208m
Mimulus guttatus
mgf013208m
I
Aquca_002_00952
Aquilegia coerulea
Aquca_002_00952
I
Aquca_006_00387
Aquilegia coerulea
Aquca_006_00387
I
Aquca_007_00702
Aquilegia coerulea
Aquca_007_00702
I
Aquca_020_00579
Aquilegia coerulea
Aquca_020_00579
I
Aquca_035_00175
Aquilegia coerulea
Aquca_035_00175
I
Bostr.0568s0133
Boechera stricta
Bostr.0568s0133
I
Bostr.10273s0468
Boechera stricta
Bostr.10273s0468
I
Bostr.13129s0152
Boechera stricta
Bostr.13129s0152
I
Bostr.14547s0014
Boechera stricta
Bostr.14547s0014
I
Bostr.7867s1578
Boechera stricta
Bostr.7867s1578
I
Cagra.1157s0023
Capsella grandiflora
Cagra.1157s0023
I
Cagra.1365s0019
Capsella grandiflora
Cagra.1365s0019
I
Cagra.20893s0010
Capsella grandiflora
Cagra.20893s0010
I
Cagra.4909s0047
Capsella grandiflora
Cagra.4909s0047
I
Carubv10000655m.g
Capsella rubella
Carubv10000655m.g
I
Carubv10001567m.g
Capsella rubella
Carubv10001567m.g
I
Carubv10005083m.g
Capsella rubella
Carubv10005083m.g
I
Carubv10020679m.g
Capsella rubella
Carubv10020679m.g
I
Carubv10028570m.g
Capsella rubella
Carubv10028570m.g
I
Ciclev10008008m.g
Citrus clementina
Ciclev10008008m.g
I
Ciclev10012135m.g
Citrus clementina
Ciclev10012135m.g
I
Ciclev10019786m.g
Citrus clementina
Ciclev10019786m.g
I
Ciclev10020053m.g
Citrus clementina
Ciclev10020053m.g
I
Ciclev10020248m.g
Citrus clementina
Ciclev10020248m.g
I
Ciclev10025735m.g
Citrus clementina
Ciclev10025735m.g
I
Ciclev10032020m.g
Citrus clementina
Ciclev10032020m.g
I
Eucgr.B00645
Eucalyptus grandis
Eucgr.B00645
I
Eucgr.B03113
Eucalyptus grandis
Eucgr.B03113
I
Eucgr.D02499
Eucalyptus grandis
Eucgr.D02499
I
Eucgr.H02385
Eucalyptus grandis
Eucgr.H02385
I
Eucgr.I00906
Eucalyptus grandis
Eucgr.I00906
I
Eucgr.I02069
Eucalyptus grandis
Eucgr.I02069
I
evm.TU.supercontig_21.176
Carica papaya
evm.TU.supercontig_21.176
I
evm.TU.supercontig_212.3
Carica papaya
evm.TU.supercontig_212.3
I
evm.TU.supercontig_289.6
Carica papaya
evm.TU.supercontig_289.6
I
evm.TU.supercontig_3.225
Carica papaya
evm.TU.supercontig_3.225
I
evm.TU.supercontig_82.59
Carica papaya
evm.TU.supercontig_82.59
I
gene04534-v1.0-hybrid
Fragaria vesca
gene04534-v1.0-hybrid
I
gene09125-v1.0-hybrid
Fragaria vesca
gene09125-v1.0-hybrid
I
gene23819-v1.0-hybrid
Fragaria vesca
gene23819-v1.0-hybrid
I
gene25546-v1.0-hybrid
Fragaria vesca
gene25546-v1.0-hybrid
I
gene26139-v1.0-hybrid
Fragaria vesca
gene26139-v1.0-hybrid
I
Gorai.001G017900
Gossypium raimondii
Gorai.001G017900
I
Gorai.001G148300
Gossypium raimondii
Gorai.001G148300
I
Gorai.001G197500
Gossypium raimondii
Gorai.001G197500
I
Gorai.006G269200
Gossypium raimondii
Gorai.006G269200
I
Gorai.007G040600
Gossypium raimondii
Gorai.007G040600
I
Gorai.007G088300
Gossypium raimondii
Gorai.007G088300
I
Gorai.007G118100
Gossypium raimondii
Gorai.007G118100
I
Gorai.007G214800
Gossypium raimondii
Gorai.007G214800
I
Gorai.008G077300
Gossypium raimondii
Gorai.008G077300
I
Gorai.008G106900
Gossypium raimondii
Gorai.008G106900
I
Gorai.009G038500
Gossypium raimondii
Gorai.009G038500
I
Gorai.009G213800
Gossypium raimondii
Gorai.009G213800
I
Gorai.009G327300
Gossypium raimondii
Gorai.009G327300
I
Gorai.013G098000
Gossypium raimondii
Gorai.013G098000
I
Lus10004630.g
Linum usitatissimum
Lus10004630.g
I
Lus10024811.g
Linum usitatissimum
Lus10024811.g
I
Lus10026684.g
Linum usitatissimum
Lus10026684.g
I
Lus10034358.g
Linum usitatissimum
Lus10034358.g
I
Lus10041592.g
Linum usitatissimum
Lus10041592.g
I
MDP0000215587
Malus domestica
MDP0000215587
I
MDP0000261293
Malus domestica
MDP0000261293
I
MDP0000439540
Malus domestica
MDP0000439540
I
MDP0000523812
Malus domestica
MDP0000523812
I
orange1.1g010045m.g
Citrus sinensis
orange1.1g010045m.g
I
orange1.1g012387m.g
Citrus sinensis
orange1.1g012387m.g
I
orange1.1g019485m.g
Citrus sinensis
orange1.1g019485m.g
I
orange1.1g019960m.g
Citrus sinensis
orange1.1g019960m.g
I
orange1.1g022782m.g
Citrus sinensis
orange1.1g022782m.g
I
orange1.1g036669m.g
Citrus sinensis
orange1.1g036669m.g
I
orange1.1g038097m.g
Citrus sinensis
orange1.1g038097m.g
I
orange1.1g038451m.g
Citrus sinensis
orange1.1g038451m.g
I
Pavir.Db01966
Panicum virgatum
Pavir.Db01966
I
Pavir.Fb01833
Panicum virgatum
Pavir.Fb01833
I
Pavir.J15280
Panicum virgatum
Pavir.J15280
I
Pavir.J15575
Panicum virgatum
Pavir.J15575
I
Pavir.J38250
Panicum virgatum
Pavir.J38250
I
Pavir.J38910
Panicum virgatum
Pavir.J38910
I
SapurV1A.0033s0400
Salix purpurea
SapurV1A.0033s0400
I
SapurV1A.0060s0510
Salix purpurea
SapurV1A.0060s0510
I
SapurV1A.0084s0570
Salix purpurea
SapurV1A.0084s0570
I
SapurV1A.0167s0140
Salix purpurea
SapurV1A.0167s0140
I
SapurV1A.0178s0150
Salix purpurea
SapurV1A.0178s0150
I
SapurV1A.0249s0140
Salix purpurea
SapurV1A.0249s0140
I
SapurV1A.0274s0040
Salix purpurea
SapurV1A.0274s0040
I
SapurV1A.0321s0050
Salix purpurea
SapurV1A.0321s0050
I
SapurV1A.0423s0130
Salix purpurea
SapurV1A.0423s0130
I
SapurV1A.0603s0060
Salix purpurea
SapurV1A.0603s0060
I
SapurV1A.0868s0010
Salix purpurea
SapurV1A.0868s0010
I
SapurV1A.2517s0020
Salix purpurea
SapurV1A.2517s0020
I
Thhalv10004889m.g
Eutrema salsugineum
Thhalv10004889m.g
I
Thhalv10013181m.g
Eutrema salsugineum
Thhalv10013181m.g
I
Thhalv10018889m.g
Eutrema salsugineum
Thhalv10018889m.g
I
Thhalv10025554m.g
Eutrema salsugineum
Thhalv10025554m.g
I
Thhalv10027863m.g
Eutrema salsugineum
Thhalv10027863m.g
I
Thhalv10028687m.g
Eutrema salsugineum
Thhalv10028687m.g
I
PK00238.1
Cannabis sativa
PK00238.1
I
PK01364.1
Cannabis sativa
PK01364.1
I
PK08539.1
Cannabis sativa
PK08539.1
I
PK10562.1
Cannabis sativa
PK10562.1
I
PK20816.1
Cannabis sativa
PK20816.1
I
PK27964.1
Cannabis sativa
PK27964.1
I
LjT43O20.130.nd
Lotus japonicus
LjT43O20.130.nd
I