Pavir.Ea03718 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ea03718 T072376_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.782 0.688
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03718.1.p bZIP 187 251
Pavir.Ea03718.2.p bZIP 187 238

Links

Other bZIP family TFs
Other Panicum virgatum TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.000
Pm016406 Prunus mume Pm016406 I 0.000
30149.m000231 Ricinus communis 30149.m000231 I 0.000
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.000
mgf005043m Mimulus guttatus mgf005043m I 0.000
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.000
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.000
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.000
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.000
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.000
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.000
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.000
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.000
MDP0000273574 Malus domestica MDP0000273574 I 0.000
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.000
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.000
Pm007619 Prunus mume Pm007619 I 0.000
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.000
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.000
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.000
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.000
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.000
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.000
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.000
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.000
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.000
PK07850.1 Cannabis sativa PK07850.1 I 0.000
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.000
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.000
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.000
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.000
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.000
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.000
Bo3g036400 Brassica oleracea Bo3g036400 I 0.000
Bo4g019620 Brassica oleracea Bo4g019620 I 0.000
Bra000291 Brassica rapa Bra000291 I 0.000
Bra004748 Brassica rapa Bra004748 I 0.000
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.000
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.000
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.000
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.000
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.000
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.000
OB02G30670 Oryza brachyantha OB02G30670 I 0.000
OBART02G23210 Oryza barthii OBART02G23210 I 0.000
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.000
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.000
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.000
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.000
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.000
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.000
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.000
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.000
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.000
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.000
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.000
Si010513m.g Setaria italica Si010513m.g I 0.000
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.000
TCM_020066 Theobroma cacao TCM_020066 I 0.000
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.000
Bo4g194080 Brassica oleracea Bo4g194080 N 0.000