PK18009.1 (Cannabis sativa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 PK18009.1 T072893_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00		 Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.855 0.774
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.855 0.774
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.855 0.774
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.820 0.661
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.820 0.661
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.820 0.661
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.820 0.661
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.820 0.661
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.820 0.661
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.815 0.645
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.815 0.645
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.805 0.742
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.805 0.742
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.799 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01158_2.00 bZIP 51 113

DNA Binding Domains

Protein ID Domain From To Sequence
PK18009.1 bZIP 199 261

Links

Other bZIP family TFs
Other Cannabis sativa TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACUA010350 Anopheles culicifacies ACUA010350 I 0.000
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.000
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.000
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.000
Tal_R004164 Tyto alba Tal_R004164 I 0.000
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.000
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.000
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.000
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.000
ACHR004409 Anopheles christyi ACHR004409 I 0.000
ACOM041529 Anopheles coluzzii ACOM041529 I 0.000
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.000
AFAF000230 Anopheles farauti AFAF000230 I 0.000
AFUN004906 Anopheles funestus AFUN004906 I 0.000
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.000
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.000
MDOA011385 Musca domestica MDOA011385 I 0.000
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.000
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.000
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.000
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.000
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.000
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.000
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.000
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.000
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.000
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.000
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.000
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.000
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.000
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.000
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.000
EBF1 Sus scrofa ENSSSCG00000017046 I 0.000
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.000
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.000
GH12956 Drosophila grimshawi FBgn0120434 I 0.000
GJ21945 Drosophila virilis FBgn0209060 I 0.000
HelroG112029 Helobdella robusta HelroG112029 I 0.000
LotgiG225788 Lottia gigantea LotgiG225788 I 0.000
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.000
csin100403 Clonorchis sinensis csin100403 N 0.000
Smp_194660 Schistosoma mansoni Smp_194660 N 0.000
SMTD_0000506301 Schistosoma mattheei SMTD_0000506301 N 0.000
T265_13606 Opisthorchis viverrini T265_13606 N 0.000