batf (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-6258076 T073081_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.829 0.758
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.829 0.758
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.818 0.742
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.818 0.742
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.818 0.742
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.818 0.742
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.818 0.742
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.818 0.742
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.818 0.742
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.818 0.742
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.788 0.613
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.788 0.613
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.788 0.613
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.788 0.613
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.788 0.613
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.788 0.613
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.788 0.613
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.788 0.613
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.788 0.613
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.786 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002938637 bZIP 25 86

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mecp2 Mus musculus ENSMUSG00000031393 D
MECP2 Homo sapiens ENSG00000169057 D
ENSSSCG00000012796 Sus scrofa ENSSSCG00000012796 I
MECP2 Oryctolagus cuniculus ENSOCUG00000013147 I
MECP2 Otolemur garnettii ENSOGAG00000015115 I
ENSONIG00000000809 Oreochromis niloticus ENSONIG00000000809 I
mecp2 Oryzias latipes ENSORLG00000020117 I
ENSPANG00000011691 Papio anubis ENSPANG00000011691 I
MECP2 Procavia capensis ENSPCAG00000011826 I
ENSPFOG00000002307 Poecilia formosa ENSPFOG00000002307 I
ENSPPYG00000020866 Pongo abelii ENSPPYG00000020866 I
ENSPSIG00000002254 Pelodiscus sinensis ENSPSIG00000002254 I
MECP2 Pan troglodytes ENSPTRG00000022424 I
Mecp2 Rattus norvegicus ENSRNOG00000056659 I
MECP2 Sorex araneus ENSSARG00000012925 I
ENSSHAG00000007851 Sarcophilus harrisii ENSSHAG00000007851 I
MECP2 Ornithorhynchus anatinus ENSOANG00000011024 I
ENSSTOG00000006094 Ictidomys tridecemlineatus ENSSTOG00000006094 I
mecp2 Tetraodon nigroviridis ENSTNIG00000005114 I
mecp2 Takifugu rubripes ENSTRUG00000006419 I
MECP2 Tursiops truncatus ENSTTRG00000004653 I
Cmyd_10000498 Chelonia mydas Cmyd_10000498 I
ENSP00000395535-D1 Bos grunniens ENSP00000395535-D1 I
ENSP00000395535 Macaca fascicularis ENSP00000395535 I
Myotis_brandtii_IRAK1_10010673 Myotis brandtii Myotis_brandtii_IRAK1_10010673 I
Ogr09995 Ophisaurus gracilis Ogr09995 I
Pvit_16673 Pogona vitticeps Pvit_16673 I
mecp2 Xenopus tropicalis XB-GENE-494740 I
mecp2.S Xenopus laevis XB-GENE-494744 I
mecp2 Gasterosteus aculeatus ENSGACG00000000798 I
ENSAMEG00000018448 Ailuropoda melanoleuca ENSAMEG00000018448 I
ENSAMXG00000017019 Astyanax mexicanus ENSAMXG00000017019 I
MECP2 Bos taurus ENSBTAG00000047855 I
MECP2 Canis familiaris ENSCAFG00000019440 I
MECP2 Callithrix jacchus ENSCJAG00000016796 I
MECP2 Cavia porcellus ENSCPOG00000012579 I
ENSCSAG00000006798 Chlorocebus sabaeus ENSCSAG00000006798 I
mecp2 Danio rerio ENSDARG00000014218 I
MECP2 Dasypus novemcinctus ENSDNOG00000013419 I
Mecp2 Dipodomys ordii ENSDORG00000014978 I
MECP2 Equus caballus ENSECAG00000018208 I
MECP2 Felis catus ENSFCAG00000011389 I
ENSOARG00000005806 Ovis aries ENSOARG00000005806 I
MECP2 Gorilla gorilla ENSGGOG00000000222 I
ENSLACG00000011281 Latimeria chalumnae ENSLACG00000011281 I
MECP2 Loxodonta africana ENSLAFG00000016292 I
ENSLOCG00000014725 Lepisosteus oculatus ENSLOCG00000014725 I
ENSMEUG00000002761 Macropus eugenii ENSMEUG00000002761 I
MECP2 Microcebus murinus ENSMICG00000005149 I
MECP2 Myotis lucifugus ENSMLUG00000014297 I
MECP2 Macaca mulatta ENSMMUG00000018704 I
MECP2 Monodelphis domestica ENSMODG00000011643 I
ENSMPUG00000009072 Mustela putorius furo ENSMPUG00000009072 I
ENSNLEG00000013783 Nomascus leucogenys ENSNLEG00000013783 I
MECP2 Anolis carolinensis ENSACAG00000012519 I