CpipJ_CPIJ006366 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ006366 T077559_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.813 0.939
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.813 0.939
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.813 0.939
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.813 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ006366-RA C2H2 ZF 432 453
CpipJ_CPIJ006366-RA C2H2 ZF 459 481
CpipJ_CPIJ006366-RA C2H2 ZF 487 509
CpipJ_CPIJ006366-RA C2H2 ZF 515 537
CpipJ_CPIJ006366-RA C2H2 ZF 543 565

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF19 Homo sapiens ENSG00000157429 D
ENSAMEG00000002368 Ailuropoda melanoleuca ENSAMEG00000002368 I
ZNF19 Canis familiaris ENSCAFG00000029432 I
ENSCJAG00000014972 Callithrix jacchus ENSCJAG00000014972 I
ENSCSAG00000004277 Chlorocebus sabaeus ENSCSAG00000004277 I
ZNF19 Felis catus ENSFCAG00000031357 I
ZNF19 Gorilla gorilla ENSGGOG00000009654 I
ZNF19 Microcebus murinus ENSMICG00000001886 I
ENSMPUG00000007911 Mustela putorius furo ENSMPUG00000007911 I
ENSNLEG00000005791 Nomascus leucogenys ENSNLEG00000005791 I
ENSPANG00000020359 Papio anubis ENSPANG00000020359 I
ENSPPYG00000007530 Pongo abelii ENSPPYG00000007530 I
ZNF19 Pan troglodytes ENSPTRG00000008322 I
ZNF19 Tursiops truncatus ENSTTRG00000001420 I
ENSP00000288177 Macaca fascicularis ENSP00000288177 I