CpipJ_CPIJ018505 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ018505 T077976_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.801 0.928
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.801 0.928
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.801 0.928
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.801 0.928
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.801 0.928
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.801 0.928
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.801 0.928
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.801 0.928
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.794 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ018505-RA C2H2 ZF 319 341
CpipJ_CPIJ018505-RA C2H2 ZF 347 369
CpipJ_CPIJ018505-RA C2H2 ZF 375 398

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
h Drosophila melanogaster FBgn0001168 D
AEPI006491 Anopheles epiroticus AEPI006491 I
RPRC000496 Rhodnius prolixus RPRC000496 I
TC012851 Tribolium castaneum TC012851 I
YQE_12940 Dendroctonus ponderosae YQE_12940 I
LCUP010072 Lucilia cuprina LCUP010072 I
LDEC021054 Leptinotarsa decemlineata LDEC021054 I
AALB005366 Anopheles albimanus AALB005366 I
AARA008572 Anopheles arabiensis AARA008572 I
ACOM024305 Anopheles coluzzii ACOM024305 I
ACUA017851 Anopheles culicifacies ACUA017851 I
ADIR003682 Anopheles dirus ADIR003682 I
NV15013 Nasonia vitripennis NV15013 I
AFAF016565 Anopheles farauti AFAF016565 I
AFUN000350 Anopheles funestus AFUN000350 I
AMEC007487 Anopheles melas AMEC007487 I
AMIN010131 Anopheles minimus AMIN010131 I
AQUA004803 Anopheles quadriannulatus AQUA004803 I
ASTEI10025 Anopheles stephensi ASTEI10025 I
LLOJ000067 Lutzomyia longipalpis LLOJ000067 I
MDOA005593 Musca domestica MDOA005593 I
PPAI006478 Phlebotomus papatasi PPAI006478 I
GF24345 Drosophila ananassae FBgn0101339 I
AAEL005480 Aedes aegypti AAEL005480 I
AAEL011943 Aedes aegypti AAEL011943 I
ACYPI004499 Acyrthosiphon pisum ACYPI004499 I
ADAC007300 Anopheles darlingi ADAC007300 I
AGAP006699 Anopheles gambiae AGAP006699 I
CPIJ004757 Culex quinquefasciatus CPIJ004757 I
h Drosophila virilis FBgn0013115 I
h Drosophila simulans FBgn0016346 I
h Drosophila willistoni FBgn0067109 I
GA19636 Drosophila pseudoobscura FBgn0079632 I
PHUM170110 Pediculus humanus PHUM170110 I
GG14338 Drosophila erecta FBgn0106599 I
GI12920 Drosophila mojavensis FBgn0135677 I
GL10333 Drosophila persimilis FBgn0147943 I
GE20765 Drosophila yakuba FBgn0238065 I
GB47799 Apis mellifera GB47799 I
HMEL008426 Heliconius melpomene HMEL008426 I
L798_01589 Zootermopsis nevadensis L798_01589 I
MCINX004301 Melitaea cinxia MCINX004301 I
CpipJ_CPIJ004757 Culex pipiens CpipJ_CPIJ004757 I