VDBG_05992 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_05992 T078395_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09333
M01892_2.00 		Neurospora crassa
NNNNGCCTDN
NHAGGCNNNN		 PBM
Weirauch et al.(2014)
pTH8940 		0.779 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_05992T0 C2H2 ZF 426 450

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
UM03525 Ustilago maydis UM03525 I
PaG_03936 Pseudozyma aphidis PaG_03936 N
PAN0_009c3772 Pseudozyma antarctica PAN0_009c3772 N
PHSY_001337 Pseudozyma hubeiensis PHSY_001337 N
sr14518 Sporisorium reilianum sr14518 N
UHOR_05421 Ustilago hordei UHOR_05421 N