ACYPI004643 (Acyrthosiphon pisum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACYPI004643 T079682_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.790 0.886
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.790 0.886
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.790 0.886
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.790 0.886
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.788 0.833
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.788 0.833
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.788 0.833
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.788 0.833
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.768 0.860
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.768 0.860
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.768 0.860
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.760 0.789
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.760 0.789
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.760 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI004643-PA C2H2 ZF 191 213
ACYPI004643-PA C2H2 ZF 222 244
ACYPI004643-PA C2H2 ZF 248 270
ACYPI004643-PA C2H2 ZF 276 298
ACYPI004643-PA C2H2 ZF 304 325

Links

Other C2H2 ZF family TFs
Other Acyrthosiphon pisum TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THITE_2117609 Thielavia terrestris THITE_2117609 N
MBR_08628 Metarhizium brunneum MBR_08628 N
MGG_08015 Magnaporthe oryzae MGG_08015 N
MGU_07938 Metarhizium guizhouense MGU_07938 N
MYCTH_71014 Myceliophthora thermophila MYCTH_71014 N
NechaG101763 Fusarium solani NechaG101763 N
NEUTE1DRAFT_147899 Neurospora tetrasperma NEUTE1DRAFT_147899 N
PFICI_13633 Pestalotiopsis fici PFICI_13633 N
S40285_07530 Stachybotrys chlorohalonata S40285_07530 N
S40288_02304 Stachybotrys chartarum S40288_02304 N
SAPIO_CDS1330 Scedosporium apiospermum SAPIO_CDS1330 N
SMAC_06370 Sordaria macrospora SMAC_06370 N
SPBR_03062 Sporothrix brasiliensis SPBR_03062 N
MAPG_01366 Magnaporthe poae MAPG_01366 N
TRIATDRAFT_297925 Trichoderma atroviride TRIATDRAFT_297925 N
TRIREDRAFT_44290 Trichoderma reesei TRIREDRAFT_44290 N
TRIVIDRAFT_71606 Trichoderma virens TRIVIDRAFT_71606 N
UCREL1_9736 Eutypa lata UCREL1_9736 N
UCRPA7_8290 Togninia minima UCRPA7_8290 N
UV8b_6674 Ustilaginoidea virens UV8b_6674 N
X797_008201 Metarhizium robertsii X797_008201 N
estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 Nectria haematococca estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 N
estExt_fgenesh3_pm.C_80304 Neurospora discreta estExt_fgenesh3_pm.C_80304 N
NCU06145 Neurospora crassa NCU06145 N
e_gw1.4.698.1 Cryphonectria parasitica e_gw1.4.698.1 N
FFUJ_03890 Fusarium fujikuroi FFUJ_03890 N
BBA_00882 Beauveria bassiana BBA_00882 N
CFIO01_11721 Colletotrichum fioriniae CFIO01_11721 N
CGGC5_10881 Colletotrichum gloeosporioides CGGC5_10881 N
CH063_01255 Colletotrichum higginsianum CH063_01255 N
CHGG_09841 Chaetomium globosum CHGG_09841 N
CMQ_1562 Grosmannia clavigera CMQ_1562 N
Cob_07208 Colletotrichum orbiculare Cob_07208 N
CPUR_07536 Claviceps purpurea CPUR_07536 N
CSUB01_01314 Colletotrichum sublineola CSUB01_01314 N
CTHT_0018200 Chaetomium thermophilum CTHT_0018200 N
F503_07557 Ophiostoma piceae uamh F503_07557 N
ACRE_061680 Acremonium chrysogenum ACRE_061680 N
FGRRES_04889 Fusarium graminearum FGRRES_04889 N
FOXG_05735 Fusarium oxysporum FOXG_05735 N
FPSE_03992 Fusarium pseudograminearum FPSE_03992 N
FVEG_03610 Fusarium verticillioides FVEG_03610 N
GGTG_03418 Gaeumannomyces graminis GGTG_03418 N
GLRG_08580 Colletotrichum graminicola GLRG_08580 N
HMPREF1624_02947 Sporothrix schenckii HMPREF1624_02947 N
MAC_06595 Metarhizium acridum MAC_06595 N
MAJ_09938 Metarhizium majus MAJ_09938 N
MAM_07567 Metarhizium album MAM_07567 N
MANI_002902 Metarhizium anisopliae MANI_002902 N