AT5G22990 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT5G22990 T080880_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G22990
M06821_2.00		 Arabidopsis thaliana
WCGWHDTCGWYNHNN
NNDNRWCGAHDWCGW		 Dap-seq
OMalley et al.(2016)
AT5G22990_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G15740
M06810_2.00 		Arabidopsis thaliana
WCGHHDYCGWY
RWCGRHDDCGW		 Dap-seq
OMalley et al.(2016)
AT2G15740_col_a 		0.825 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G22990.1 C2H2 ZF 246 269

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV06_05296 Exophiala oligosperma PV06_05296 N
AB06661.1 Alternaria brassicicola AB06661.1 N
e_gw1.50.54.1 Mycosphaerella fijiensis e_gw1.50.54.1 N
Z519_08371 Cladophialophora bantiana Z519_08371 N
Z518_02089 Rhinocladiella mackenziei Z518_02089 N
Z518_00766 Rhinocladiella mackenziei Z518_00766 N
Z517_06555 Fonsecaea pedrosoi Z517_06555 N
PV11_04485 Exophiala sideris PV11_04485 N
PV11_01810 Exophiala sideris PV11_01810 N
PV10_02880 Exophiala mesophila PV10_02880 N
PV08_11635 Exophiala spinifera PV08_11635 N
PV08_08727 Exophiala spinifera PV08_08727 N
PV07_05631 Cladophialophora immunda PV07_05631 N
A1O1_01832 Capronia coronata A1O1_01832 N
PV05_02243 Exophiala xenobiotica PV05_02243 N
PV04_04618 Capronia semiimmersa PV04_04618 N
HMPREF1541_10181 Cyphellophora europaea HMPREF1541_10181 N
HMPREF1120_03298 Exophiala dermatitidis HMPREF1120_03298 N
G647_05669 Cladophialophora carrionii G647_05669 N
G647_04039 Cladophialophora carrionii G647_04039 N
A1O9_09700 Exophiala aquamarina A1O9_09700 N
A1O7_04642 Cladophialophora yegresii A1O7_04642 N
A1O5_01092 Cladophialophora psammophila A1O5_01092 N
A1O3_00383 Capronia epimyces A1O3_00383 N
A1O3_00020 Capronia epimyces A1O3_00020 N