Bo8g027000 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo8g027000 T081775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 1.000
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g027000.1 C2H2 ZF 330 352
Bo8g027000.1 C2H2 ZF 351 382

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si024429m.g Setaria italica Si024429m.g N 0.000
Pavir.Aa01633 Panicum virgatum Pavir.Aa01633 N 0.000
Pavir.Ca00986 Panicum virgatum Pavir.Ca00986 N 0.000