CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SP7
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000033292
T088053_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sp7
M09009_2.00
Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB
Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A
0.827
1.000
SP7
M10258_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSX_Q3
0.827
1.000
SP8
M02898_2.00
Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB
SELEX
Jolma et al.(2013)
SP8_1
0.764
0.855
SP8
M04517_2.00
Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN
SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX
0.764
0.855
SP9
M04645_2.00
Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB
SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX
0.764
0.855
SP8
M04518_2.00
Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY
SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX
0.764
0.855
SP9
M04646_2.00
Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY
SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX
0.764
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000005689
C2H2 ZF
294
318
HSCHIPGCGKVYGKASHLKAHLRWH
ENSBTAP00000005689
C2H2 ZF
324
348
FVCNWLFCGKRFTRSDELERHVRTH
ENSBTAP00000005689
C2H2 ZF
354
376
FTCLLCSKRFTRSDHLSKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00152p00031760
Amborella trichopoda
AMTR_s00152p00031760
N
0.000
BZIP23
Arabidopsis thaliana
AT2G16770
N
0.000
BZIP19
Arabidopsis thaliana
AT4G35040
N
0.000
BGIOSGA004628
Oryza indica
BGIOSGA004628
N
0.000
BGIOSGA017801
Oryza indica
BGIOSGA017801
N
0.000
BGIOSGA034759
Oryza indica
BGIOSGA034759
N
0.000
BGIOSGA036957
Oryza indica
BGIOSGA036957
N
0.000
Bo1g006780
Brassica oleracea
Bo1g006780
N
0.000
Bo3g091670
Brassica oleracea
Bo3g091670
N
0.000
Bo3g167300
Brassica oleracea
Bo3g167300
N
0.000
Bo9g024230
Brassica oleracea
Bo9g024230
N
0.000
Bra011580
Brassica rapa
Bra011580
N
0.000
Bra013048
Brassica rapa
Bra013048
N
0.000
Bra034668
Brassica rapa
Bra034668
N
0.000
BRADI2G21197
Brachypodium distachyon
BRADI2G21197
N
0.000
BRADI2G52590
Brachypodium distachyon
BRADI2G52590
N
0.000
F775_16738
Aegilops tauschii
F775_16738
N
0.000
GLYMA11G11540
Glycine max
GLYMA11G11540
N
0.000
GRMZM2G033230
Zea mays
GRMZM2G033230
N
0.000
GRMZM2G175870
Zea mays
GRMZM2G175870
N
0.000
GSMUA_Achr4G00320_001
Musa acuminata
GSMUA_Achr4G00320_001
N
0.000
GSMUA_Achr4G10150_001
Musa acuminata
GSMUA_Achr4G10150_001
N
0.000
GSMUA_Achr7G03840_001
Musa acuminata
GSMUA_Achr7G03840_001
N
0.000
LPERR01G29490
Leersia perrieri
LPERR01G29490
N
0.000
LPERR05G17340
Leersia perrieri
LPERR05G17340
N
0.000
LPERR11G02130
Leersia perrieri
LPERR11G02130
N
0.000
LPERR12G02240
Leersia perrieri
LPERR12G02240
N
0.000
MLOC_13410
Hordeum vulgare
MLOC_13410
N
0.000
MLOC_5655
Hordeum vulgare
MLOC_5655
N
0.000
MTR_4g073100
Medicago truncatula
MTR_4g073100
N
0.000
OB0044G10110
Oryza brachyantha
OB0044G10110
N
0.000
OB01G42980
Oryza brachyantha
OB01G42980
N
0.000
OB05G28920
Oryza brachyantha
OB05G28920
N
0.000
OB12G12480
Oryza brachyantha
OB12G12480
N
0.000
OBART01G34150
Oryza barthii
OBART01G34150
N
0.000
OBART05G21450
Oryza barthii
OBART05G21450
N
0.000
OBART11G02390
Oryza barthii
OBART11G02390
N
0.000
OBART12G02110
Oryza barthii
OBART12G02110
N
0.000
OGLUM01G38420
Oryza glumaepatula
OGLUM01G38420
N
0.000
OGLUM05G22660
Oryza glumaepatula
OGLUM05G22660
N
0.000
OGLUM11G02090
Oryza glumaepatula
OGLUM11G02090
N
0.000
OLONG_011776
Oryza longistaminata
OLONG_011776
N
0.000
OLONG_016758
Oryza longistaminata
OLONG_016758
N
0.000
OMERI01G30960
Oryza meridionalis
OMERI01G30960
N
0.000
OMERI12G01070
Oryza meridionalis
OMERI12G01070
N
0.000
ONIVA01G38950
Oryza nivara
ONIVA01G38950
N
0.000
ONIVA05G22130
Oryza nivara
ONIVA05G22130
N
0.000
ONIVA11G02620
Oryza nivara
ONIVA11G02620
N
0.000
OPUNC01G33180
Oryza punctata
OPUNC01G33180
N
0.000
OPUNC05G19110
Oryza punctata
OPUNC05G19110
N
0.000
OPUNC12G02170
Oryza punctata
OPUNC12G02170
N
0.000
ORGLA01G0280700
Oryza glaberrima
ORGLA01G0280700
N
0.000
ORGLA05G0186200
Oryza glaberrima
ORGLA05G0186200
N
0.000
ORUFI01G37470
Oryza rufipogon
ORUFI01G37470
N
0.000
ORUFI05G22690
Oryza rufipogon
ORUFI05G22690
N
0.000
ORUFI12G02510
Oryza rufipogon
ORUFI12G02510
N
0.000
OS01G0801901
Oryza sativa
OS01G0801901
N
0.000
OS05G0495200
Oryza sativa
OS05G0495200
N
0.000
OS11G0139500
Oryza sativa
OS11G0139500
N
0.000
PGSC0003DMG400011944
Solanum tuberosum
PGSC0003DMG400011944
N
0.000
PGSC0003DMG401006188
Solanum tuberosum
PGSC0003DMG401006188
N
0.000
POPTR_0001s05750
Populus trichocarpa
POPTR_0001s05750
N
0.000
POPTR_0003s20320
Populus trichocarpa
POPTR_0003s20320
N
0.000
PRUPE_ppa009913mg
Prunus persica
PRUPE_ppa009913mg
N
0.000
Sb03g037300
Sorghum bicolor
Sb03g037300
N
0.000
Sb09g024290
Sorghum bicolor
Sb09g024290
N
0.000
bZIP23
Arabidopsis lyrata
scaffold_303970.1
N
0.000
bZIP19
Arabidopsis lyrata
scaffold_700623.1
N
0.000
SELMODRAFT_409920
Selaginella moellendorffii
SELMODRAFT_409920
N
0.000
SELMODRAFT_414462
Selaginella moellendorffii
SELMODRAFT_414462
N
0.000
Si002893m.g
Setaria italica
Si002893m.g
N
0.000
Solyc01g111580.2
Solanum lycopersicum
Solyc01g111580.2
N
0.000
TCM_006625
Theobroma cacao
TCM_006625
N
0.000
TCM_042360
Theobroma cacao
TCM_042360
N
0.000
Traes_1AL_00A8A2030
Triticum aestivum
Traes_1AL_00A8A2030
N
0.000
TRAES3BF086800020CFD_g
Triticum aestivum
TRAES3BF086800020CFD_g
N
0.000
TRIUR3_18393
Triticum urartu
TRIUR3_18393
N
0.000
TRIUR3_21208
Triticum urartu
TRIUR3_21208
N
0.000
VIT_03s0038g02420
Vitis vinifera
VIT_03s0038g02420
N
0.000
ATBZIP24
Vitis vinifera
VIT_13s0158g00380
N
0.000
Ca_24168
Cicer arietinum
Ca_24168
N
0.000
Cla016078
Citrullus lanatus
Cla016078
N
0.000
Cla020585
Citrullus lanatus
Cla020585
N
0.000
Pm020862
Prunus mume
Pm020862
N
0.000
28095.m000094
Ricinus communis
28095.m000094
N
0.000
cassava766.valid.m1
Manihot esculenta
cassava766.valid.m1
N
0.000
cassava767.valid.m1
Manihot esculenta
cassava767.valid.m1
N
0.000
cassava7721.valid.m1
Manihot esculenta
cassava7721.valid.m1
N
0.000
Cucsa.234250
Cucumis sativus
Cucsa.234250
N
0.000
Cucsa.370550
Cucumis sativus
Cucsa.370550
N
0.000
gw1.34.187.1
Physcomitrella patens
gw1.34.187.1
N
0.000
mgf003848m
Mimulus guttatus
mgf003848m
N
0.000
Aquca_075_00033
Aquilegia coerulea
Aquca_075_00033
N
0.000
Bostr.18351s0138
Boechera stricta
Bostr.18351s0138
N
0.000
Bostr.7867s1363
Boechera stricta
Bostr.7867s1363
N
0.000
Cagra.0839s0005
Capsella grandiflora
Cagra.0839s0005
N
0.000
Cagra.2350s0050
Capsella grandiflora
Cagra.2350s0050
N
0.000
Carubv10005538m.g
Capsella rubella
Carubv10005538m.g
N
0.000
Carubv10014436m.g
Capsella rubella
Carubv10014436m.g
N
0.000
Ciclev10028931m.g
Citrus clementina
Ciclev10028931m.g
N
0.000
Eucgr.I01416
Eucalyptus grandis
Eucgr.I01416
N
0.000
evm.TU.supercontig_37.136
Carica papaya
evm.TU.supercontig_37.136
N
0.000
gene07554-v1.0-hybrid
Fragaria vesca
gene07554-v1.0-hybrid
N
0.000
Gorai.002G197800
Gossypium raimondii
Gorai.002G197800
N
0.000
Gorai.005G254200
Gossypium raimondii
Gorai.005G254200
N
0.000
Lus10005073.g
Linum usitatissimum
Lus10005073.g
N
0.000
Lus10014121.g
Linum usitatissimum
Lus10014121.g
N
0.000
Lus10016368.g
Linum usitatissimum
Lus10016368.g
N
0.000
Lus10027847.g
Linum usitatissimum
Lus10027847.g
N
0.000
MDP0000159670
Malus domestica
MDP0000159670
N
0.000
orange1.1g024365m.g
Citrus sinensis
orange1.1g024365m.g
N
0.000
Pavir.Db00007
Panicum virgatum
Pavir.Db00007
N
0.000
Pavir.Ea03172
Panicum virgatum
Pavir.Ea03172
N
0.000
Pavir.Eb03174
Panicum virgatum
Pavir.Eb03174
N
0.000
Pavir.J00911
Panicum virgatum
Pavir.J00911
N
0.000
SapurV1A.0009s0600
Salix purpurea
SapurV1A.0009s0600
N
0.000
SapurV1A.0445s0220
Salix purpurea
SapurV1A.0445s0220
N
0.000
SapurV1A.0923s0130
Salix purpurea
SapurV1A.0923s0130
N
0.000
Thhalv10022810m.g
Eutrema salsugineum
Thhalv10022810m.g
N
0.000
Thhalv10026007m.g
Eutrema salsugineum
Thhalv10026007m.g
N
0.000
PDK_20s1365351g001
Phoenix dactylifera
PDK_20s1365351g001
N
0.000
PDK_20s1623091g001
Phoenix dactylifera
PDK_20s1623091g001
N
0.000