CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OVOL2
(
Canis familiaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCAFG00000005453
T088281_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN
NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.819
0.957
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.807
0.957
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.807
0.957
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.807
0.957
OVOL2
M10207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.807
0.957
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.807
0.957
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.807
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000008136
C2H2 ZF
119
141
HNCELCGKGFRLQRMLNRHLKCH
ENSCAFP00000008136
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSCAFP00000008136
C2H2 ZF
175
198
YKCDICNKAFTQRCSLESHLKKIH
ENSCAFP00000008136
C2H2 ZF
214
237
YVCEDCGYTGPTQEDLYLHVNSAH
ENSCAFP00000040029
C2H2 ZF
119
141
HNCELCGKGFRLQRMLNRHLKCH
ENSCAFP00000040029
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSCAFP00000040029
C2H2 ZF
175
198
YKCDICNKAFTQRCSLESHLKKIH
ENSCAFP00000040029
C2H2 ZF
214
237
YVCEDCGYTGPTQEDLYLHVNSAH
Links
Other
C2H2 ZF
family TFs
Other
Canis familiaris
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG06752
Caenorhabditis briggsae
CBG06752
N
ceh-79
Caenorhabditis elegans
WBGene00007749
N